RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 BLMHQ13867 455 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 NAA35Q5VZE5 725 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 C6orf89Q6UWU4 347 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
LITAF-221ENST00000622633 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 TRIM7Q9C029 511 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 LAMB1P07942 1786 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 RCCD1A6NED2 376 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 EIF4BP23588 611 aaKnown RBP13.65□□□□□ -0.22
LITAF-221ENST00000622633 CCNE1P24864 410 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 MTIF2P46199 727 aaKnown RBP13.65□□□□□ -0.22
LITAF-221ENST00000622633 SKOR1P84550 965 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 DEUP1Q05D60 604 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
LITAF-221ENST00000622633 LACRTQ9GZZ8 138 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 ACTR5Q9H9F9 607 aaPredicted RBP13.65□□□□□ -0.22
LITAF-221ENST00000622633 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 PDLIM1O00151 329 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 BUB1BO60566 1050 aaPredicted RBP13.64□□□□□ -0.23
LITAF-221ENST00000622633 ATP4AP20648 1035 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 PPP4CP60510 307 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 GSTO1P78417 241 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 IFT88Q13099 833 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 CUL3Q13618 768 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 NFIXQ14938 502 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 NONOQ15233 471 aaKnown RBP eCLIP13.64□□□□□ -0.23
LITAF-221ENST00000622633 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 JAKMIP2Q96AA8 810 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 CAPZA3Q96KX2 299 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 MMS19Q96T76 1030 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 CDK8P49336 464 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 INHBCP55103 352 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 KRT83P78385 493 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 PDCLQ13371 301 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
LITAF-221ENST00000622633 MEA1Q16626 185 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 AK8Q96MA6 479 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 EYA3Q99504 573 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 C7orf25Q9BPX7 421 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
LITAF-221ENST00000622633 CUEDC2Q9H467 287 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 NHEJ1Q9H9Q4 299 aaPredicted RBP13.64□□□□□ -0.23
LITAF-221ENST00000622633 ZNHIT6Q9NWK9 470 aaKnown RBP13.64□□□□□ -0.23
LITAF-221ENST00000622633 ZNF510Q9Y2H8 683 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 SAR1BQ9Y6B6 198 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
LITAF-221ENST00000622633 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 DNM1LO00429 736 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 ANP32DO95626 131 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 CYP27A1Q02318 531 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 NUGGCQ68CJ6 796 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 ARMC9Q7Z3E5 817 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 C6orf50Q9HD87 102 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 GGA2Q9UJY4 613 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 COL5A3P25940 1745 aaPredicted RBP13.63□□□□□ -0.23
LITAF-221ENST00000622633 SMIM24O75264 130 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 ATP6V1G2O95670 118 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 MYBL1P10243 752 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 CYLC1P35663 651 aaPredicted RBP13.63□□□□□ -0.23
LITAF-221ENST00000622633 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 NEK8Q86SG6 692 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 PIGSQ96S52 555 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
LITAF-221ENST00000622633 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
LITAF-221ENST00000622633 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 RGL2O15211 777 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 UPP2O95045 317 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 LDHCP07864 332 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 TXKP42681 527 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 BTDP43251 543 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 USP14P54578 494 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 XRCC4Q13426 336 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 SLMAPQ14BN4 828 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 PAPD7Q5XG87 772 aaKnown RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 ZNF473Q8WTR7 871 aaKnown RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 KCNN1Q92952 543 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms