RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 SCAF8Q9UPN6 1271 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 ATP5JP18859 108 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 LARP4BQ92615 738 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 TUBGCP2Q9BSJ2 902 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 PCDHA7Q9UN72 937 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 BMP3P12645 472 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 TWF2Q6IBS0 349 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 ABTB1Q969K4 478 aaPredicted RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNXB-209ENST00000613214 NGRNQ9NPE2 291 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
TNXB-209ENST00000613214 XDHP47989 1333 aa16.69■□□□□ 0.26
TNXB-209ENST00000613214 PSDA5PKW4 1024 aaPredicted RBP16.68■□□□□ 0.26
TNXB-209ENST00000613214 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 NRBP1Q9UHY1 535 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 CLCA2Q9UQC9 943 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 PRPF4O43172 522 aaKnown RBP eCLIP16.68■□□□□ 0.26
TNXB-209ENST00000613214 AFPP02771 609 aaKnown RBP16.68■□□□□ 0.26
TNXB-209ENST00000613214 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
TNXB-209ENST00000613214 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 HOMER3Q9NSC5 361 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 SPTLC3Q9NUV7 552 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 HEY1Q9Y5J3 304 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 ARHGAP25P42331 645 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 PSMC5P62195 406 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 PGBD3Q8N328 593 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 ADCY9O60503 1353 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 RAPGEF5Q92565 580 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 IFT43Q96FT9 208 aa16.68■□□□□ 0.26
TNXB-209ENST00000613214 RRAGDQ9NQL2 400 aaPredicted RBP16.68■□□□□ 0.26
TNXB-209ENST00000613214 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 AOC3Q16853 763 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 DDX53Q86TM3 631 aaKnown RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 SLC35F6Q8N357 371 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 PDE11AQ9HCR9 933 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 HIP1RO75146 1068 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 HLA-DPA1P20036 260 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 GCKP35557 465 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 CCT5P48643 541 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 NR5A1Q13285 461 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 CCDC85BQ15834 202 aaPredicted RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 MIS12Q9H081 205 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 ANP32DO95626 131 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 IFT88Q13099 833 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 DRP2Q13474 957 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 LBRQ14739 615 aaKnown RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 RASIP1Q5U651 963 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 ATXN7L3BQ96GX2 97 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 SAMSN1Q9NSI8 373 aaKnown RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 KCNG1Q9UIX4 513 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 ABCB11O95342 1321 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 EIF4E1BA6NMX2 242 aaKnown RBP16.67■□□□□ 0.26
TNXB-209ENST00000613214 BCAS4Q8TDM0 211 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 HEMGNQ9BXL5 484 aa16.67■□□□□ 0.26
TNXB-209ENST00000613214 H0YCG3 227 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 CYP27A1Q02318 531 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 AGR3Q8TD06 166 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 USP14P54578 494 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 SH3KBP1Q96B97 665 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 INTS9Q9NV88 658 aaKnown RBP16.66■□□□□ 0.26
TNXB-209ENST00000613214 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 TUBBP07437 444 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 PSMA2P25787 234 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 C2orf69Q8N8R5 385 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 ZFYVE19Q96K21 471 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 CEP19Q96LK0 163 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 SMAD5Q99717 465 aaKnown RBP16.66■□□□□ 0.26
TNXB-209ENST00000613214 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 RECQLP46063 649 aaPredicted RBP16.66■□□□□ 0.26
TNXB-209ENST00000613214 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
TNXB-209ENST00000613214 FAM83BQ5T0W9 1011 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 RFWD2Q8NHY2 731 aa16.66■□□□□ 0.26
TNXB-209ENST00000613214 ERVV-2B6SEH9 535 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 SYF2O95926 243 aaKnown RBP16.65■□□□□ 0.26
TNXB-209ENST00000613214 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
TNXB-209ENST00000613214 PSAPP07602 524 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 GLE1Q53GS7 698 aaKnown RBP16.65■□□□□ 0.26
TNXB-209ENST00000613214 RHPN2Q8IUC4 686 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 TESK2Q96S53 571 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 SMYD3Q9H7B4 428 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 SOX11P35716 441 aa16.65■□□□□ 0.26
TNXB-209ENST00000613214 RBBP7Q16576 425 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms