RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 RPUSD2Q8IZ73 545 aaKnown RBP20.52■□□□□ 0.88
IGHV3-41-201ENST00000613121 CCDC155Q8N6L0 562 aa20.52■□□□□ 0.88
IGHV3-41-201ENST00000613121 SMARCAD1Q9H4L7 1026 aa20.52■□□□□ 0.88
IGHV3-41-201ENST00000613121 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
IGHV3-41-201ENST00000613121 TCEAL9Q9UHQ7 104 aa20.52■□□□□ 0.88
IGHV3-41-201ENST00000613121 IGLV3-22A0A075B6J6 115 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 SMIM10L2AP0DMW4 78 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 SMIM10L2BP0DMW5 78 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 GNAT1P11488 350 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 ACTR2P61160 394 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 ZNF200P98182 395 aaPredicted RBP20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 ATP6V0A1Q93050 837 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 SCLYQ96I15 445 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 RNPEPQ9H4A4 650 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 TBC1D22BQ9NU19 505 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 ERAP1Q9NZ08 941 aa20.51■□□□□ 0.87
IGHV3-41-201ENST00000613121 MARK3P27448 753 aa20.5■□□□□ 0.87
IGHV3-41-201ENST00000613121 RNPC3Q96LT9 517 aaKnown RBP20.5■□□□□ 0.87
IGHV3-41-201ENST00000613121 LLPHQ9BRT6 129 aaKnown RBP20.5■□□□□ 0.87
IGHV3-41-201ENST00000613121 IL23AQ9NPF7 189 aa20.5■□□□□ 0.87
IGHV3-41-201ENST00000613121 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
IGHV3-41-201ENST00000613121 M0R2N6 131 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 BACH1O14867 736 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 FGBP02675 491 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 KRT2P35908 639 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 PTK7Q13308 1070 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 NPY5RQ15761 445 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 INF2Q27J81 1249 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 LRIT3Q3SXY7 679 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 PIK3AP1Q6ZUJ8 805 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 FAM184AQ8NB25 1140 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 IL27Q8NEV9 243 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 OXER1Q8TDS5 423 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 TNPO1Q92973 898 aaKnown RBP20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 WNT8AQ9H1J5 351 aa20.49■□□□□ 0.87
IGHV3-41-201ENST00000613121 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 STAT5BP51692 787 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 LETM2Q2VYF4 491 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 MIS18BP1Q6P0N0 1132 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 PSRC1Q6PGN9 363 aaPredicted RBP20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 TBC1D32Q96NH3 1257 aa20.48■□□□□ 0.87
IGHV3-41-201ENST00000613121 DNAH12Q6ZR08 3092 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 PITPNM1O00562 1244 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 DHX15O43143 795 aaKnown RBP20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 HIC1Q14526 733 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 TMEM240Q5SV17 173 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 FAM160B1Q5W0V3 765 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 KRT40Q6A162 431 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 AFAP1L1Q8TED9 768 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 SAMM50Q9Y512 469 aa20.47■□□□□ 0.87
IGHV3-41-201ENST00000613121 MSH4O15457 936 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 TREHO43280 583 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 EDIL3O43854 480 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 MARCH6O60337 910 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 LGR5O75473 907 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 ATG7O95352 703 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 TDP2O95551 362 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 CCNE2O96020 404 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 THPOP40225 353 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 HMGN5P82970 282 aaKnown RBP20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 KRT76Q01546 638 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 PPFIA1Q13136 1202 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 Q4G0T1 1027 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 SWSAP1Q6NVH7 229 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 NEK8Q86SG6 692 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 PCYT2Q99447 389 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 DDX25Q9UHL0 483 aaKnown RBP20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 TRPC6Q9Y210 931 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 NRCAMQ92823 1304 aa20.46■□□□□ 0.87
IGHV3-41-201ENST00000613121 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 CYP3A7-CYP3A51PA0A087WV96 503 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 SOX1O00570 391 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 CCNT1O60563 726 aaKnown RBP20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 GAS7O60861 476 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 MMP1P03956 469 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 CKBP12277 381 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 SELPP16109 830 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 CYP3A7P24462 503 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 RFC2P35250 354 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 IGBP1P78318 339 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 GUCY1B3Q02153 619 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 NR5A1Q13285 461 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 LRCH2Q5VUJ6 765 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 ZNF746Q6NUN9 644 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 ABHD15Q6UXT9 468 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 OTOP2Q7RTS6 562 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 DHX38Q92620 1227 aaKnown RBP20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 LENG9Q96B70 501 aa20.45■□□□□ 0.86
IGHV3-41-201ENST00000613121 LRCH3Q96II8 777 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms