RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
VCX3A-203ENST00000612369 EMSYQ7Z589 1322 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 NRCAMQ92823 1304 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TET1Q8NFU7 2136 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 GSTTP1A0A1W2PQM5 241 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 MEIS1O00470 390 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 EFCAB14O75071 495 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TOB2Q14106 344 aaPredicted RBP20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TRAF7Q6Q0C0 670 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TRIM50Q86XT4 487 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 CCDC148Q8NFR7 591 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 WNT8BQ93098 351 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 PHKBQ93100 1093 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 PGBD1Q96JS3 809 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 SDF4Q9BRK5 362 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 SMARCAD1Q9H4L7 1026 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 JPH1Q9HDC5 661 aaPredicted RBP20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TMEM260Q9NX78 707 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 ERAP1Q9NZ08 941 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 SLC9A2Q9UBY0 812 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 TELO2Q9Y4R8 837 aa20.78■□□□□ 0.92
VCX3A-203ENST00000612369 RSPH10B2B2RC85 870 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 TREHO43280 583 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 EIF5BO60841 1220 aaKnown RBP20.77■□□□□ 0.92
VCX3A-203ENST00000612369 NBNO60934 754 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 CYP3A4P08684 503 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 RSPH10BP0C881 870 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 ZNF76P36508 570 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 THPOP40225 353 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 ARHGAP4P98171 946 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 REXO1Q8N1G1 1221 aaKnown RBP20.77■□□□□ 0.92
VCX3A-203ENST00000612369 CYP2W1Q8TAV3 490 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 BICD2Q8TD16 824 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 NKX2-4Q9H2Z4 354 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 SETD4Q9NVD3 440 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 PKD2L1Q9P0L9 805 aa20.77■□□□□ 0.92
VCX3A-203ENST00000612369 YBX2Q9Y2T7 364 aaKnown RBP20.77■□□□□ 0.92
VCX3A-203ENST00000612369 GBF1Q92538 1859 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 ABHD14A-ACY1A0A1B0GW23 586 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 KCNJ6P48051 423 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
VCX3A-203ENST00000612369 ADAM17P78536 824 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 JAKMIP3Q5VZ66 844 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 TRIM22Q8IYM9 498 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 MAFAQ8NHW3 353 aaPredicted RBP20.76■□□□□ 0.91
VCX3A-203ENST00000612369 CRYGNQ8WXF5 182 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 GLG1Q92896 1179 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 TNPO1Q92973 898 aaKnown RBP20.76■□□□□ 0.91
VCX3A-203ENST00000612369 SLC26A6Q9BXS9 759 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 AGO4Q9HCK5 861 aaKnown RBP20.76■□□□□ 0.91
VCX3A-203ENST00000612369 SH3GLB2Q9NR46 395 aa20.76■□□□□ 0.91
VCX3A-203ENST00000612369 KAT6AQ92794 2004 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 LGR5O75473 907 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 ARP10275 920 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 RABGGTBP53611 331 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 ANAPC15P60006 121 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 IKBKEQ14164 716 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 LMBR1Q8WVP7 490 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 GAS2L1Q99501 681 aaPredicted RBP20.75■□□□□ 0.91
VCX3A-203ENST00000612369 UPF3BQ9BZI7 483 aaKnown RBP20.75■□□□□ 0.91
VCX3A-203ENST00000612369 AZI2Q9H6S1 392 aa20.75■□□□□ 0.91
VCX3A-203ENST00000612369 CPLX1O14810 134 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 WDR5P61964 334 aaKnown RBP20.74■□□□□ 0.91
VCX3A-203ENST00000612369 MBTPS1Q14703 1052 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 PPP2R2DQ66LE6 453 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 TAF2Q6P1X5 1199 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 CPLX2Q6PUV4 134 aaKnown RBP20.74■□□□□ 0.91
VCX3A-203ENST00000612369 RPAINQ86UA6 219 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 HERC6Q8IVU3 1022 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 NCOA5Q9HCD5 579 aaKnown RBP20.74■□□□□ 0.91
VCX3A-203ENST00000612369 PDRG1Q9NUG6 133 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 CHD9Q3L8U1 2897 aa20.74■□□□□ 0.91
VCX3A-203ENST00000612369 ACTR2P61160 394 aa20.73■□□□□ 0.91
VCX3A-203ENST00000612369 SETQ01105 290 aaPredicted RBP20.73■□□□□ 0.91
VCX3A-203ENST00000612369 SSRP1Q08945 709 aaKnown RBP20.73■□□□□ 0.91
VCX3A-203ENST00000612369 PPFIA1Q13136 1202 aa20.73■□□□□ 0.91
VCX3A-203ENST00000612369 PLPPR4Q7Z2D5 763 aa20.73■□□□□ 0.91
VCX3A-203ENST00000612369 FAM177A1Q8N128 213 aaPredicted RBP20.73■□□□□ 0.91
VCX3A-203ENST00000612369 PRDM12Q9H4Q4 367 aa20.73■□□□□ 0.91
VCX3A-203ENST00000612369 IGLV3-22A0A075B6J6 115 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 RRN3P2A6NIE6 340 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 FAM86B1E9PN63 330 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 ATG7O95352 703 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 RPLP2P05387 115 aaKnown RBP20.72■□□□□ 0.91
VCX3A-203ENST00000612369 FAM86B2P0C5J1 330 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 SLC26A2P50443 739 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 ITGB3BPQ13352 177 aaPredicted RBP20.72■□□□□ 0.91
VCX3A-203ENST00000612369 FAM26DQ5JW98 314 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 PLA2G4DQ86XP0 818 aa20.72■□□□□ 0.91
VCX3A-203ENST00000612369 DEXIO95424 95 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 MYOGP15173 224 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 MARK3P27448 753 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 STAT5BP51692 787 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 GRIK4Q16099 956 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 PLEKHG4Q58EX7 1191 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 RSPH3Q86UC2 560 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 PCYT2Q99447 389 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 TBC1D22BQ9NU19 505 aa20.71■□□□□ 0.91
VCX3A-203ENST00000612369 VPS54Q9P1Q0 977 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms