RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, human

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLK4-215	ENST00000611733	LMBRD1	Q9NUN5	540 aa		13.58	□□□□□ -0.24
CLK4-215	ENST00000611733	ELP1	O95163	1332 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	CTAGE5	O15320	804 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	PGK1	P00558	417 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	BEX3	Q00994	111 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	TMEM266	Q2M3C6	531 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	ADAL	Q6DHV7	355 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	MIER3	Q7Z3K6	550 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	SYMPK	Q92797	1274 aa	Known RBP	13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	PLIN2	Q99541	437 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	GPR20	Q99678	358 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	PRDM10	Q9NQV6	1147 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	DISC1	Q9NRI5	854 aa		13.57	□□□□□ -0.24
CLK4-215	ENST00000611733	LONP1	P36776	959 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	CYP4A11	Q02928	519 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	LAMC2	Q13753	1193 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	LHX8	Q68G74	356 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	ABHD15	Q6UXT9	468 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	TLK2	Q86UE8	772 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	PCYT2	Q99447	389 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	GOLPH3L	Q9H4A5	285 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	HMX1	Q9NP08	348 aa	Predicted RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	SAMM50	Q9Y512	469 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733		A0A087X0B3	334 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733		A0A1B0GVL5	298 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	DUSP11	O75319	330 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	MED24	O75448	989 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	ATG7	O95352	703 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	SPATA31C1	P0DKV0	1188 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	MCM4	P33991	863 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	KRT76	Q01546	638 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	CTTN	Q14247	550 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	ZRSR1	Q15695	479 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	UGCG	Q16739	394 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	BANK1	Q8NDB2	785 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	LRRC15	Q8TF66	581 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	DYDC2	Q96IM9	177 aa		13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	DDX20	Q9UHI6	824 aa	Known RBP	13.56	□□□□□ -0.24
CLK4-215	ENST00000611733	ZBTB39	O15060	712 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	NKRF	O15226	690 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	SLITRK3	O94933	977 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	TCF7	P36402	384 aa	Predicted RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	KARS	Q15046	597 aa	Known RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	EPHA7	Q15375	998 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	RESP18	Q5W5W9	173 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	SWSAP1	Q6NVH7	229 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	CATSPER3	Q86XQ3	398 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	TRIM50	Q86XT4	487 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	ZNF579	Q8NAF0	562 aa	Known RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	SEPT1	Q8WYJ6	367 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	EMID1	Q96A84	441 aa	Predicted RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	HSD17B14	Q9BPX1	270 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	PCDHA10	Q9Y5I2	948 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	BRCA2	P51587	3418 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	SYNRG	Q9UMZ2	1314 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	WDR64	B1ANS9	1081 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	RARB	P10826	455 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	CCL5	P13501	91 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	PKN2	Q16513	984 aa	Known RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	UTP14C	Q5TAP6	766 aa	Known RBP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	CABP7	Q86V35	215 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	SNX29	Q8TEQ0	813 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	PPP1R13L	Q8WUF5	828 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	PNMA5	Q96PV4	448 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	MCOLN1	Q9GZU1	580 aa		13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CLK4-215	ENST00000611733	POTEB3	A0JP26	581 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	NOP56	O00567	594 aa	Known RBP	13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	MYCN	P04198	464 aa	Predicted RBP	13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	MMP3	P08254	477 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	C6orf222	P0C671	652 aa	Predicted RBP	13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	SUPT20HL2	P0C7V6	817 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	CMA1	P23946	247 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	POTEB	Q6S5H4	581 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	TPH2	Q8IWU9	490 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	PDILT	Q8N807	584 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	FSIP1	Q8NA03	581 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	PPTC7	Q8NI37	304 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	ZNF333	Q96JL9	665 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	AP5M1	Q9H0R1	490 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	RNF208	Q9H0X6	261 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	XPNPEP3	Q9NQH7	507 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	GABBR1	Q9UBS5	961 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733		Q9Y3F1	56 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	IGKV6D-21	A0A0A0MT36	114 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733		A0A1W2PQ27	194 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733		A0A1W2PQ64	194 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733		A0A1W2PQD8	194 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733		A6NJR5	290 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	ZNF862	O60290	1169 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	ADAMTS4	O75173	837 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	PFKFB1	P16118	471 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	LIG1	P18858	919 aa		13.54	□□□□□ -0.24
CLK4-215	ENST00000611733	ATP4A	P20648	1035 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms