RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PPP2R3AQ06190 1150 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 CEP55Q53EZ4 464 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 SLC35F6Q8N357 371 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 RABGAP1Q9Y3P9 1069 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 ICAM1P05362 532 aa31.03■■■□□ 2.56
CSPG5-205ENST00000610462 MARSP56192 900 aaKnown RBP31.03■■■□□ 2.56
CSPG5-205ENST00000610462 UBXN2AP68543 259 aa31.03■■■□□ 2.56
CSPG5-205ENST00000610462 KRT83P78385 493 aa31.03■■■□□ 2.56
CSPG5-205ENST00000610462 HSD17B14Q9BPX1 270 aa31.03■■■□□ 2.56
CSPG5-205ENST00000610462 NHEJ1Q9H9Q4 299 aaPredicted RBP31.03■■■□□ 2.56
CSPG5-205ENST00000610462 RGL1Q9NZL6 768 aa31.03■■■□□ 2.56
CSPG5-205ENST00000610462 WDR46O15213 610 aaKnown RBP31.02■■■□□ 2.56
CSPG5-205ENST00000610462 HNRNPH3P31942 346 aaKnown RBP31.02■■■□□ 2.56
CSPG5-205ENST00000610462 EDRF1Q3B7T1 1238 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 BHMT2Q9H2M3 363 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 HAUS4Q9H6D7 363 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 MMRN2Q9H8L6 949 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 GINM1Q9NU53 330 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 EGFRP00533 1210 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 HERVK_113P62684 666 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 FBXO38Q6PIJ6 1188 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 ZNF662Q6ZS27 426 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 SFR1Q86XK3 245 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 LPAR1Q92633 364 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 CCPG1Q9ULG6 757 aa31.02■■■□□ 2.56
CSPG5-205ENST00000610462 ZNF536O15090 1300 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 CTAGE9A4FU28 777 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 HSD17B4P51659 736 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 TUBB2AQ13885 445 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 PRPF38AQ8NAV1 312 aaKnown RBP31.01■■■□□ 2.56
CSPG5-205ENST00000610462 AGBL1Q96MI9 1066 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 TUBB2BQ9BVA1 445 aa31.01■■■□□ 2.56
CSPG5-205ENST00000610462 FAM207AQ9NSI2 230 aaPredicted RBP31.01■■■□□ 2.56
CSPG5-205ENST00000610462 EIF3CLB5ME19 914 aaKnown RBP31.01■■■□□ 2.55
CSPG5-205ENST00000610462 PRELPP51888 382 aa31.01■■■□□ 2.55
CSPG5-205ENST00000610462 SETQ01105 290 aaPredicted RBP31.01■■■□□ 2.55
CSPG5-205ENST00000610462 EPM2AIP1Q7L775 607 aaPredicted RBP31.01■■■□□ 2.55
CSPG5-205ENST00000610462 EIF3CQ99613 913 aaKnown RBP31.01■■■□□ 2.55
CSPG5-205ENST00000610462 TANGO6Q9C0B7 1094 aa31.01■■■□□ 2.55
CSPG5-205ENST00000610462 KIAA1683Q9H0B3 1180 aa31.01■■■□□ 2.55
CSPG5-205ENST00000610462 PLAGL2Q9UPG8 496 aa31.01■■■□□ 2.55
CSPG5-205ENST00000610462 EPHB6O15197 1021 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 GAS7O60861 476 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 CASP5P51878 434 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 DYDC2Q96IM9 177 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 RUSC1Q9BVN2 902 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 MTFR1LQ9H019 292 aa31■■■□□ 2.55
CSPG5-205ENST00000610462 SLITRK3O94933 977 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 CTTNQ14247 550 aaKnown RBP30.99■■■□□ 2.55
CSPG5-205ENST00000610462 EDEM3Q9BZQ6 932 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 ERCC3P19447 782 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 MUTP22033 750 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 SLC30A10Q6XR72 485 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 TRIM59Q8IWR1 403 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 NAPGQ99747 312 aaPredicted RBP30.99■■■□□ 2.55
CSPG5-205ENST00000610462 ZNF577Q9BSK1 485 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 WDR11Q9BZH6 1224 aa30.99■■■□□ 2.55
CSPG5-205ENST00000610462 CTNND1O60716 968 aaKnown RBP30.98■■■□□ 2.55
CSPG5-205ENST00000610462 H2AFXP16104 143 aaPredicted RBP30.98■■■□□ 2.55
CSPG5-205ENST00000610462 ADAM9Q13443 819 aa30.98■■■□□ 2.55
CSPG5-205ENST00000610462 CDC23Q9UJX2 597 aa30.98■■■□□ 2.55
CSPG5-205ENST00000610462 TRAF3IP3Q9Y228 551 aa30.98■■■□□ 2.55
CSPG5-205ENST00000610462 CHMP2AO43633 222 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 ARP10275 920 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 KCNMA1Q12791 1236 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 RINT1Q6NUQ1 792 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 TPH2Q8IWU9 490 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 NEK11Q8NG66 645 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 HOOK2Q96ED9 719 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 CETN3O15182 167 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 TBCAO75347 108 aaKnown RBP30.97■■■□□ 2.55
CSPG5-205ENST00000610462 IPO7O95373 1038 aaKnown RBP30.97■■■□□ 2.55
CSPG5-205ENST00000610462 KNOP1Q1ED39 458 aaKnown RBP30.97■■■□□ 2.55
CSPG5-205ENST00000610462 MXRA8Q9BRK3 442 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 TRIM10Q9UDY6 481 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 GUCA1BQ9UMX6 200 aa30.97■■■□□ 2.55
CSPG5-205ENST00000610462 LOXHD1Q8IVV2 1947 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 RSPH10B2B2RC85 870 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 RSPH10BP0C881 870 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 GMPSP49915 693 aaPredicted RBP30.96■■■□□ 2.55
CSPG5-205ENST00000610462 BMT2Q1RMZ1 405 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 ARHGAP27Q6ZUM4 889 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 KRT26Q7Z3Y9 468 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 KIAA1328Q86T90 577 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 MICALL2Q8IY33 904 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 PIGOQ8TEQ8 1089 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 CLEC4DQ8WXI8 215 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 FAM184BQ9ULE4 1060 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 RPTORQ8N122 1335 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 GAP43P17677 238 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 RSRC2Q7L4I2 434 aaKnown RBP30.96■■■□□ 2.55
CSPG5-205ENST00000610462 SMCR8Q8TEV9 937 aaPredicted RBP30.96■■■□□ 2.55
CSPG5-205ENST00000610462 BAP1Q92560 729 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 TEKT3Q9BXF9 490 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 UNC45AQ9H3U1 944 aa30.96■■■□□ 2.55
CSPG5-205ENST00000610462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.96■■■□□ 2.55
CSPG5-205ENST00000610462 LTBP3Q9NS15 1303 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 MYBP10242 640 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 HOXD13P35453 343 aa30.95■■■□□ 2.55
CSPG5-205ENST00000610462 GHRHRQ02643 423 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms