RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NOSTRINQ8IVI9 506 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 SAMD3Q8N6K7 520 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 NETO1Q8TDF5 533 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 SLC39A13Q96H72 371 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 NUP88Q99567 741 aaPredicted RBP6.62□□□□□ -1.35
LINC00397-202ENST00000606785 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 ZNF700Q9H0M5 742 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 LRRC4CQ9HCJ2 640 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 PRDM11Q9NQV5 511 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 TOMM22Q9NS69 142 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 ATG3Q9NT62 314 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 MARCH2Q9P0N8 246 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 RNF114Q9Y508 228 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 COMMD10Q9Y6G5 202 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 X6R8D5 127 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 TMEM265A0A087WTH1 108 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA12O60330 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 HIP1RO75146 1068 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 LTFP02788 710 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 COL6A2P12110 1019 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 TAL1P17542 331 aaPredicted RBP6.61□□□□□ -1.35
LINC00397-202ENST00000606785 VCAM1P19320 739 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 SSTR4P31391 388 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 GTF2H3Q13889 308 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 FSTL4Q6MZW2 842 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 TEX2Q8IWB9 1127 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 CMIPQ8IY22 773 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 CMTR2Q8IYT2 770 aaKnown RBP6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
LINC00397-202ENST00000606785 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 CLIP3Q96DZ5 547 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 HSPBAP1Q96EW2 488 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 ZDHHC5Q9C0B5 715 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 CHST12Q9NRB3 414 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 GULP1Q9UBP9 304 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 COA3Q9Y2R0 106 aaPredicted RBP6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA9Q9Y5G4 932 aaKnown RBP6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA8Q9Y5G5 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA7Q9Y5G6 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA6Q9Y5G7 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA3Q9Y5H0 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 PCDHGA2Q9Y5H1 932 aa6.61□□□□□ -1.35
LINC00397-202ENST00000606785 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 GOLGA8BA8MQT2 603 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 C22orf46C9J442 243 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 KCNK3O14649 394 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 NKRFO15226 690 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 XPOTO43592 962 aaKnown RBP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 DGKIO75912 1065 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 GPR3P46089 330 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 KIF11P52732 1056 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 PURAQ00577 322 aaKnown RBP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 FIGNQ5HY92 759 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 NLGN2Q8NFZ4 835 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 SH3RF2Q8TEC5 729 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 USP33Q8TEY7 942 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 FBXO41Q8TF61 875 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 AIFM3Q96NN9 605 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 MPHOSPH6Q99547 160 aaKnown RBP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 ACSS2Q9NR19 701 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00397-202ENST00000606785 ZBTB21Q9ULJ3 1066 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 B3GALT1Q9Y5Z6 326 aa6.6□□□□□ -1.35
LINC00397-202ENST00000606785 KLHL33A6NCF5 533 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 FADS2P1A8MWK0 482 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 SCDO00767 359 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 PPP1R11O60927 126 aaPredicted RBP6.59□□□□□ -1.35
LINC00397-202ENST00000606785 CLASP2O75122 1294 aaKnown RBP6.59□□□□□ -1.35
LINC00397-202ENST00000606785 CYP17A1P05093 508 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 FSTP19883 344 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 LPOP22079 712 aaPredicted RBP6.59□□□□□ -1.35
LINC00397-202ENST00000606785 BRD3Q15059 726 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 MROH9Q5TGP6 573 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 EFCAB2Q5VUJ9 269 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 EP400NLQ6ZTU2 488 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 FRMD7Q6ZUT3 714 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 RIOX2Q8IUF8 465 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 ZZZ3Q8IYH5 903 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 NLGN4XQ8N0W4 816 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 PIP4K2CQ8TBX8 421 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 PLEKHO2Q8TD55 490 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 DLG3Q92796 817 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 MAP6Q96JE9 813 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 MS4A5Q9H3V2 200 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 RCAN3Q9UKA8 241 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 DSEQ9UL01 958 aa6.59□□□□□ -1.35
LINC00397-202ENST00000606785 A0A1W2PQ45 241 aaPredicted RBP6.58□□□□□ -1.36
LINC00397-202ENST00000606785 A0A1W2PQY0 241 aa6.58□□□□□ -1.36
LINC00397-202ENST00000606785 KRIT1O00522 736 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms