RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 SLC37A4O43826 429 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 GJB2P29033 226 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 MAGEA10P43363 369 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-210ENST00000601444 HIC1Q14526 733 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 GDF6Q6KF10 455 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-210ENST00000601444 MBOAT7Q96N66 472 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 PCYT2Q99447 389 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 KATNAL1Q9BW62 490 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 SEZ6LQ9BYH1 1024 aa22.76■■□□□ 1.23
SSBP4-210ENST00000601444 WNT7AO00755 349 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 KIAA0355O15063 1070 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 CYP2C9P11712 490 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 CUL4AQ13619 759 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 CHRDL2Q6WN34 429 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 C7orf31Q8N865 590 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 BADQ92934 168 aa22.75■■□□□ 1.23
SSBP4-210ENST00000601444 DDX25Q9UHL0 483 aaKnown RBP22.75■■□□□ 1.23
SSBP4-210ENST00000601444 CCNT1O60563 726 aaKnown RBP22.74■■□□□ 1.23
SSBP4-210ENST00000601444 ZNF200P98182 395 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-210ENST00000601444 PTPN11Q06124 597 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-210ENST00000601444 SAFBQ15424 915 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSBP4-210ENST00000601444 MOXD1Q6UVY6 613 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 SESTD1Q86VW0 696 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 SLC5A5Q92911 643 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 CTAGE1Q96RT6 745 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 PPP1R12CQ9BZL4 782 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 RNPEPQ9H4A4 650 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 TBC1D22BQ9NU19 505 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 GTF2IRD1Q9UHL9 959 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 SMC3Q9UQE7 1217 aa22.74■■□□□ 1.23
SSBP4-210ENST00000601444 COLQQ9Y215 455 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-210ENST00000601444 KIF28PB7ZC32 967 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 ATG7O95352 703 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 RAG1P15918 1043 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 MARK3P27448 753 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 GDF15Q99988 308 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 UMODL1Q5DID0 1318 aa22.73■■□□□ 1.23
SSBP4-210ENST00000601444 LGR5O75473 907 aa22.72■■□□□ 1.23
SSBP4-210ENST00000601444 PTGISQ16647 500 aa22.72■■□□□ 1.23
SSBP4-210ENST00000601444 ABHD15Q6UXT9 468 aa22.72■■□□□ 1.23
SSBP4-210ENST00000601444 ETNPPLQ8TBG4 499 aa22.72■■□□□ 1.23
SSBP4-210ENST00000601444 GLG1Q92896 1179 aa22.72■■□□□ 1.23
SSBP4-210ENST00000601444 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.72■■□□□ 1.23
SSBP4-210ENST00000601444 PSMD10O75832 226 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 TIMP1P01033 207 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 SMIM10L2AP0DMW4 78 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 SMIM10L2BP0DMW5 78 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 CYP2C18P33260 490 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 LRCH2Q5VUJ6 765 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 POTEDQ86YR6 584 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 RIT2Q99578 217 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 LBHD1Q9BQE6 289 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-210ENST00000601444 FOXP1Q9H334 677 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-210ENST00000601444 PRO3102Q9H379 93 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 SMARCAD1Q9H4L7 1026 aa22.71■■□□□ 1.23
SSBP4-210ENST00000601444 ZNF215Q9UL58 517 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-210ENST00000601444 IGKV6D-21A0A0A0MT36 114 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 RBAK-RBAKDNI3L0D1 243 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 K7ELQ4 463 aaPredicted RBP22.7■■□□□ 1.22
SSBP4-210ENST00000601444 GAS7O60861 476 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 SUPT20HL2P0C7V6 817 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 ATP2B1P20020 1258 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 ZNF746Q6NUN9 644 aaPredicted RBP22.7■■□□□ 1.22
SSBP4-210ENST00000601444 CCDC60Q8IWA6 550 aaPredicted RBP22.7■■□□□ 1.22
SSBP4-210ENST00000601444 NOC4LQ9BVI4 516 aaKnown RBP22.7■■□□□ 1.22
SSBP4-210ENST00000601444 UNC45AQ9H3U1 944 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 HIPK3Q9H422 1215 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 KCNMB3Q9NPA1 279 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 SETD4Q9NVD3 440 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 EMSYQ7Z589 1322 aa22.7■■□□□ 1.22
SSBP4-210ENST00000601444 LTBP2Q14767 1821 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 CHMP2AO43633 222 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 GCFC2P16383 781 aaKnown RBP22.69■■□□□ 1.22
SSBP4-210ENST00000601444 STAT5BP51692 787 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 KRT76Q01546 638 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 SWSAP1Q6NVH7 229 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 HAS1Q92839 578 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 SNX21Q969T3 373 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 TEKT3Q9BXF9 490 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 AZI2Q9H6S1 392 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 FOXD4L1Q9NU39 408 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 ERAP1Q9NZ08 941 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 NOD1Q9Y239 953 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 KIF3AQ9Y496 699 aa22.69■■□□□ 1.22
SSBP4-210ENST00000601444 C17orf102A2RUQ5 167 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 BACH1O14867 736 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 HOXC8P31273 242 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 CCL23P55773 120 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
SSBP4-210ENST00000601444 MIS18BP1Q6P0N0 1132 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 NOSTRINQ8IVI9 506 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 DHX38Q92620 1227 aaKnown RBP22.68■■□□□ 1.22
SSBP4-210ENST00000601444 WNT8BQ93098 351 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 WNT8AQ9H1J5 351 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 SAMM50Q9Y512 469 aa22.68■■□□□ 1.22
SSBP4-210ENST00000601444 TREHO43280 583 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 ATP4AP20648 1035 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 U2AF2P26368 475 aaKnown RBP eCLIP22.67■■□□□ 1.22
SSBP4-210ENST00000601444 EPHB4P54760 987 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms