RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 DTNBO60941 627 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 CD4P01730 458 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 GNAT1P11488 350 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 ACTR2P61160 394 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 NR5A1Q13285 461 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAM160B1Q5W0V3 765 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 MIS18BP1Q6P0N0 1132 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 GLG1Q92896 1179 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 RIT2Q99578 217 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 FOXP1Q9H334 677 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 BTBD18B2RXH4 712 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 DDX39AO00148 427 aaKnown RBP13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 MARCH6O60337 910 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 GJB2P29033 226 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 SLC26A2P50443 739 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 PTGISQ16647 500 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 LENG9Q96B70 501 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 BCAS3Q9H6U6 928 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 TBX21Q9UL17 535 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 CEP290O15078 2479 aa13.64□□□□□ -0.23
ARHGEF1-216ENST00000598587 A0A1W2PPC1 479 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 C17orf102A2RUQ5 167 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TRIM43BA6NCK2 446 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 H3BQV1 296 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 K7ELQ4 463 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 BACH1O14867 736 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TBX3O15119 743 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 MSH4O15457 936 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 LGR5O75473 907 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TDP2O95551 362 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TIMP1P01033 207 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 PSAPP07602 524 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 SFNP31947 248 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 MAGEA10P43363 369 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 JAK3P52333 1124 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 FPGSQ05932 587 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 BFSP2Q13515 415 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TNFRSF25Q93038 417 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TRIM43Q96BQ3 446 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 FAM20AQ96MK3 541 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 MBOAT7Q96N66 472 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 HDAC6Q9UBN7 1215 aa13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-216ENST00000598587 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 DHX15O43143 795 aaKnown RBP13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 ATG7O95352 703 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 PDCP20941 246 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 BMP8BP34820 402 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 GDF6Q6KF10 455 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 MFSD5Q6N075 450 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 RDM1Q8NG50 284 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 GDF15Q99988 308 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 ZNF302Q9NR11 478 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
ARHGEF1-216ENST00000598587 SCN5AQ14524 2016 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 NEMFO60524 1076 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 MARK3P27448 753 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 STAT5BP51692 787 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 PTK7Q13308 1070 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.234e-9■■■□□ 14.7
ARHGEF1-216ENST00000598587 CUL4AQ13619 759 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
ARHGEF1-216ENST00000598587 ABHD15Q6UXT9 468 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms