RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TMEM260Q9NX78 707 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 NFASCO94856 1347 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 NRCAMQ92823 1304 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 CDH23Q9H251 3354 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 KIAA1217Q5T5P2 1943 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ZBBXA8MT70 800 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 TREHO43280 583 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 NBNO60934 754 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 CAND2O75155 1236 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ARP10275 920 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ZNF76P36508 570 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ARHGAP4P98171 946 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 SP4Q02446 784 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 GRIN2CQ14957 1233 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ZNF618Q5T7W0 954 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 JAKMIP3Q5VZ66 844 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 TRIM50Q86XT4 487 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 WNT8BQ93098 351 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 IL17RAQ96F46 866 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 PGBD1Q96JS3 809 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 SDF4Q9BRK5 362 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 SLC26A6Q9BXS9 759 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 NCOA5Q9HCD5 579 aaKnown RBP12□□□□□ -0.49
CCDC9-203ENST00000596938 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
CCDC9-203ENST00000596938 JPH1Q9HDC5 661 aaPredicted RBP12□□□□□ -0.49
CCDC9-203ENST00000596938 SETD4Q9NVD3 440 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
CCDC9-203ENST00000596938 RSPH10B2B2RC85 870 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 EFCAB14O75071 495 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 LGR5O75473 907 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 ATG7O95352 703 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 RSPH10BP0C881 870 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 THPOP40225 353 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
CCDC9-203ENST00000596938 CNKSR3Q6P9H4 555 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 PLPPR4Q7Z2D5 763 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 RPAINQ86UA6 219 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
CCDC9-203ENST00000596938 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
CCDC9-203ENST00000596938 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 GLG1Q92896 1179 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 SLC9A7Q96T83 725 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 SLC28A3Q9HAS3 691 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 PKD2L1Q9P0L9 805 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
CCDC9-203ENST00000596938 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 FAM86B1E9PN63 330 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 CPLX1O14810 134 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 FAM86B2P0C5J1 330 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 CIITAP33076 1130 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 RABGGTBP53611 331 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 ACTR2P61160 394 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 ITGB3BPQ13352 177 aaPredicted RBP11.98□□□□□ -0.49
CCDC9-203ENST00000596938 IKBKEQ14164 716 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 MBTPS1Q14703 1052 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
CCDC9-203ENST00000596938 SLC17A8Q8NDX2 589 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 MYLIPQ8WY64 445 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
CCDC9-203ENST00000596938 PCYT2Q99447 389 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 AZI2Q9H6S1 392 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 YBX2Q9Y2T7 364 aaKnown RBP11.98□□□□□ -0.49
CCDC9-203ENST00000596938 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
CCDC9-203ENST00000596938 IGKV6D-21A0A0A0MT36 114 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 KIF28PB7ZC32 967 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 IPO5O00410 1097 aaKnown RBP11.97□□□□□ -0.49
CCDC9-203ENST00000596938 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
CCDC9-203ENST00000596938 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 DEXIO95424 95 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 SLC26A2P50443 739 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 STAT5BP51692 787 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 USP11P51784 963 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 WDR5P61964 334 aaKnown RBP11.97□□□□□ -0.49
CCDC9-203ENST00000596938 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 FAM26DQ5JW98 314 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 LMBR1Q8WVP7 490 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
CCDC9-203ENST00000596938 NKX2-4Q9H2Z4 354 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 TBC1D22BQ9NU19 505 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
CCDC9-203ENST00000596938 MBLAC1A4D2B0 266 aaPredicted RBP11.96□□□□□ -0.49
CCDC9-203ENST00000596938 RPLP2P05387 115 aaKnown RBP11.96□□□□□ -0.49
CCDC9-203ENST00000596938 MYOGP15173 224 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 FOSL2P15408 326 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 MARK3P27448 753 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 KCNJ6P48051 423 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 NLRP5P59047 1200 aa11.96□□□□□ -0.49
CCDC9-203ENST00000596938 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
CCDC9-203ENST00000596938 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1233.9 ms