RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-216ENST00000591648 ZSWIM6Q9HCJ5 1215 aa29.47■■■□□ 2.31
TPGS2-216ENST00000591648 KCNH7Q9NS40 1196 aa29.47■■■□□ 2.31
TPGS2-216ENST00000591648 FOSP01100 380 aaPredicted RBP29.46■■■□□ 2.31
TPGS2-216ENST00000591648 PDIA3P30101 505 aaKnown RBP29.46■■■□□ 2.31
TPGS2-216ENST00000591648 HOXC8P31273 242 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 CLK2P49760 499 aaKnown RBP29.46■■■□□ 2.31
TPGS2-216ENST00000591648 SEPT1Q8WYJ6 367 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 UIMC1Q96RL1 719 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 SLC26A6Q9BXS9 759 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 PCDHA11Q9Y5I1 949 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 NID2Q14112 1375 aa29.46■■■□□ 2.31
TPGS2-216ENST00000591648 CTSHP09668 335 aa29.45■■■□□ 2.31
TPGS2-216ENST00000591648 ARHGAP4P98171 946 aa29.45■■■□□ 2.31
TPGS2-216ENST00000591648 NTRK3Q16288 839 aa29.45■■■□□ 2.31
TPGS2-216ENST00000591648 PPP2R2DQ66LE6 453 aa29.45■■■□□ 2.31
TPGS2-216ENST00000591648 CYP46A1Q9Y6A2 500 aa29.45■■■□□ 2.31
TPGS2-216ENST00000591648 PRPF3O43395 683 aaKnown RBP29.44■■■□□ 2.3
TPGS2-216ENST00000591648 CXCL10P02778 98 aa29.44■■■□□ 2.3
TPGS2-216ENST00000591648 CNKSR3Q6P9H4 555 aa29.44■■■□□ 2.3
TPGS2-216ENST00000591648 LMBR1Q8WVP7 490 aa29.44■■■□□ 2.3
TPGS2-216ENST00000591648 SLC9A7Q96T83 725 aa29.44■■■□□ 2.3
TPGS2-216ENST00000591648 RSPH10B2B2RC85 870 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 CA3P07451 260 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 RSPH10BP0C881 870 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 ZNF76P36508 570 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 SREBF1P36956 1147 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 KCNJ6P48051 423 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 WDR5P61964 334 aaKnown RBP29.43■■■□□ 2.3
TPGS2-216ENST00000591648 DEFB103AP81534 67 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 AKAP17AQ02040 695 aaKnown RBP29.43■■■□□ 2.3
TPGS2-216ENST00000591648 AP3B2Q13367 1082 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 CEP55Q53EZ4 464 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 HERC6Q8IVU3 1022 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 GLG1Q92896 1179 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 OSBPL7Q9BZF2 842 aa29.43■■■□□ 2.3
TPGS2-216ENST00000591648 JPH1Q9HDC5 661 aaPredicted RBP29.43■■■□□ 2.3
TPGS2-216ENST00000591648 MAFGO15525 162 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 BAIAP3O94812 1187 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 STK3Q13188 491 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 ITGB3BPQ13352 177 aaPredicted RBP29.42■■■□□ 2.3
TPGS2-216ENST00000591648 RASGRP4Q8TDF6 673 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 GAS2L1Q99501 681 aaPredicted RBP29.42■■■□□ 2.3
TPGS2-216ENST00000591648 GLT8D2Q9H1C3 349 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 CERS4Q9HA82 394 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 SLC9A2Q9UBY0 812 aa29.42■■■□□ 2.3
TPGS2-216ENST00000591648 DDX39AO00148 427 aaKnown RBP29.41■■■□□ 2.3
TPGS2-216ENST00000591648 EPB41L2O43491 1005 aaKnown RBP29.41■■■□□ 2.3
TPGS2-216ENST00000591648 ARHGEF15O94989 841 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 PARNO95453 639 aaKnown RBP29.41■■■□□ 2.3
TPGS2-216ENST00000591648 ADGRE1Q14246 886 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.41■■■□□ 2.3
TPGS2-216ENST00000591648 PPM1EQ8WY54 764 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 PCYT2Q99447 389 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 ZMYND12Q9H0C1 365 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 AGO4Q9HCK5 861 aaKnown RBP29.41■■■□□ 2.3
TPGS2-216ENST00000591648 C6orf50Q9HD87 102 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 VPS54Q9P1Q0 977 aa29.41■■■□□ 2.3
TPGS2-216ENST00000591648 GNAT1P11488 350 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 IGFBP4P22692 258 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 EVCP57679 992 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 RUFY4Q6ZNE9 571 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 USP38Q8NB14 1042 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 PHOSPHO2Q8TCD6 241 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 ZBTB10Q96DT7 871 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 SDF4Q9BRK5 362 aa29.4■■■□□ 2.3
TPGS2-216ENST00000591648 FAM86B1E9PN63 330 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 MEIS1O00470 390 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 LGR5O75473 907 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 FAM86B2P0C5J1 330 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 IFNAR1P17181 557 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 IGBP1P78318 339 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 ADAM17P78536 824 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 PPFIA1Q13136 1202 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 DBF4BQ8NFT6 615 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 RNF26Q9BY78 433 aaPredicted RBP29.39■■■□□ 2.3
TPGS2-216ENST00000591648 ERAP1Q9NZ08 941 aa29.39■■■□□ 2.3
TPGS2-216ENST00000591648 ESYT2A0FGR8 921 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 ACTR2P61160 394 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 FAM117BQ6P1L5 589 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 PLA2G4DQ86XP0 818 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 REXO1Q8N1G1 1221 aaKnown RBP29.38■■■□□ 2.29
TPGS2-216ENST00000591648 CCDC12Q8WUD4 166 aaPredicted RBP29.38■■■□□ 2.29
TPGS2-216ENST00000591648 SMARCAD1Q9H4L7 1026 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 PDRG1Q9NUG6 133 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 NRCAMQ92823 1304 aa29.38■■■□□ 2.29
TPGS2-216ENST00000591648 RFXAPO00287 272 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 TLL1O43897 1013 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 IKBKEQ14164 716 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 GRIK4Q16099 956 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 ERICH6BQ5W0A0 696 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 SPRED2Q7Z698 418 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 TEX2Q8IWB9 1127 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 TM6SF1Q9BZW5 370 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 NFASCO94856 1347 aa29.37■■■□□ 2.29
TPGS2-216ENST00000591648 PTPRSQ13332 1948 aa29.36■■■□□ 2.29
TPGS2-216ENST00000591648 LCHNA4D1U4 455 aa29.36■■■□□ 2.29
TPGS2-216ENST00000591648 DLL1O00548 723 aa29.36■■■□□ 2.29
TPGS2-216ENST00000591648 DTNBO60941 627 aa29.36■■■□□ 2.29
TPGS2-216ENST00000591648 CCDC85BQ15834 202 aaPredicted RBP29.36■■■□□ 2.29
TPGS2-216ENST00000591648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.36■■■□□ 2.293e-10■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms