RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MROH7Q68CQ1 1323 aa11.88□□□□□ -0.51
SDF2-208ENST00000589788 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 KPNA6O60684 536 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 MYL3P08590 195 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 IFNAR1P17181 557 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 ANKRD1Q15327 319 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 PCNX4Q63HM2 1172 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
SDF2-208ENST00000589788 PHKBQ93100 1093 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 LBHD1Q9BQE6 289 aaPredicted RBP11.87□□□□□ -0.51
SDF2-208ENST00000589788 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
SDF2-208ENST00000589788 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
SDF2-208ENST00000589788 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
SDF2-208ENST00000589788 MYH7BA7E2Y1 1941 aa11.87□□□□□ -0.51
SDF2-208ENST00000589788 POM121CA8CG34 1229 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 TGFB3P10600 412 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 NEK4P51957 841 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 SSRP1Q08945 709 aaKnown RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 NTRK3Q16288 839 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 DHX37Q8IY37 1157 aaKnown RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 AFG1LQ8WV93 481 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 RTEL1Q9NZ71 1219 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 PCDHA6Q9UN73 950 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 PCDHA8Q9Y5H6 950 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 ARVCFO00192 962 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 TLR3O15455 904 aaKnown RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 CDKL5O76039 1030 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 RGS20O76081 388 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 CLTBP09497 229 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 PSMC6P62333 389 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 MRPS9P82933 396 aaKnown RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 ARHGAP1Q07960 439 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 ITGA7Q13683 1181 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 DESI1Q6ICB0 168 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 BRICD5Q6PL45 260 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 IL17RAQ96F46 866 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 TOX2Q96NM4 488 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
SDF2-208ENST00000589788 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 PDLIM7Q9NR12 457 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
SDF2-208ENST00000589788 ESYT2A0FGR8 921 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 FIBPO43427 364 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 SORBS3O60504 671 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 GGPS1O95749 300 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 MMP3P08254 477 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 UBA1P22314 1058 aaKnown RBP11.85□□□□□ -0.51
SDF2-208ENST00000589788 GNA11P29992 359 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 MAGEA10P43363 369 aaPredicted RBP11.85□□□□□ -0.51
SDF2-208ENST00000589788 CDK7P50613 346 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 AK2P54819 239 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 AP3B2Q13367 1082 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 PKN1Q16512 942 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 DGKDQ16760 1214 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 CELF3Q5SZQ8 465 aaKnown RBP11.85□□□□□ -0.51
SDF2-208ENST00000589788 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
SDF2-208ENST00000589788 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
SDF2-208ENST00000589788 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 PCDHB3Q9Y5E6 796 aa11.85□□□□□ -0.51
SDF2-208ENST00000589788 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 PFKFB2O60825 505 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 DEXIO95424 95 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 RAG1P15918 1043 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 ICAM3P32942 547 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 NEDD9Q14511 834 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 FAM47CQ5HY64 1035 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 JAKMIP3Q5VZ66 844 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 MCTP2Q6DN12 878 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
SDF2-208ENST00000589788 ZMYND12Q9H0C1 365 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms