RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 BFSP2Q13515 415 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 NPY5RQ15761 445 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 RASIP1Q5U651 963 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 PLA2G4DQ86XP0 818 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 RPUSD2Q8IZ73 545 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 CAGE1Q8TC20 777 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 ZNF215Q9UL58 517 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 PCDHA4Q9UN74 947 aa11.69□□□□□ -0.54
PPP4R1-220ENST00000581835 GBF1Q92538 1859 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 C17orf102A2RUQ5 167 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 EDIL3O43854 480 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 FGBP02675 491 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 RFC2P35250 354 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 SMAD3P84022 425 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 TRIM71Q2Q1W2 868 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 GALNT17Q6IS24 598 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 DEFB128Q7Z7B8 93 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 BLIDQ8IZY5 108 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 DAGLBQ8NCG7 672 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 HERVK_113Q902F9 699 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 WNT8BQ93098 351 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 KIF2CQ99661 725 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 SETD4Q9NVD3 440 aa11.68□□□□□ -0.54
PPP4R1-220ENST00000581835 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 DHX15O43143 795 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 TREHO43280 583 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 LGR5O75473 907 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ATG7O95352 703 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 PFKMP08237 780 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 CKBP12277 381 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 FDPSP14324 419 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 SELPP16109 830 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 USP11P51784 963 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ACTR2P61160 394 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ADAM17P78536 824 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 SETQ01105 290 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 GPNMBQ14956 572 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 PRR16Q569H4 304 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 Q7L0L9 218 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 LRRC8DQ7L1W4 858 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 SERINC5Q86VE9 423 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 TBCKQ8TEA7 893 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 AFAP1L1Q8TED9 768 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 GLG1Q92896 1179 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ATP6V0A1Q93050 837 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 PCYT2Q99447 389 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 SMARCAD1Q9H4L7 1026 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ERAP1Q9NZ08 941 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 EVPLQ92817 2033 aa11.67□□□□□ -0.54
PPP4R1-220ENST00000581835 COL6A3P12111 3177 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 CCNE2O96020 404 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 GNAT1P11488 350 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 XBP1P17861 261 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 MARK3P27448 753 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 LMBR1Q8WVP7 490 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 LENG9Q96B70 501 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 UIMC1Q96RL1 719 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 ZNF577Q9BSK1 485 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 GJB4Q9NTQ9 266 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-220ENST00000581835 NRCAMQ92823 1304 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 IGKV6D-21A0A0A0MT36 114 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 GRXCR1A8MXD5 290 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 DDX39AO00148 427 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 STAT5BP51692 787 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 ZNF618Q5T7W0 954 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 ABHD15Q6UXT9 468 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 PLPPR4Q7Z2D5 763 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 WASF1Q92558 559 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 MTIF3Q9H2K0 278 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 AZI2Q9H6S1 392 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
PPP4R1-220ENST00000581835 PTPRSQ13332 1948 aa11.64□□□□□ -0.55
PPP4R1-220ENST00000581835 LOXHD1Q8IVV2 1947 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms