RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 LAMA3Q16787 3333 aa21.23■□□□□ 0.99
PPP4R1-215ENST00000580182 NFASCO94856 1347 aa21.23■□□□□ 0.99
PPP4R1-215ENST00000580182 RBAK-RBAKDNI3L0D1 243 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 DHX15O43143 795 aaKnown RBP21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 ACRP10323 421 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 XBP1P17861 261 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 FAM177A1Q8N128 213 aaPredicted RBP21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 WASF1Q92558 559 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 DHX38Q92620 1227 aaKnown RBP21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 LENG9Q96B70 501 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 TBC1D32Q96NH3 1257 aa21.22■□□□□ 0.99
PPP4R1-215ENST00000580182 SMIM10L2AP0DMW4 78 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 SMIM10L2BP0DMW5 78 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 ACTR2P61160 394 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 PCYT2Q99447 389 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 ZNF577Q9BSK1 485 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 RNPEPQ9H4A4 650 aa21.21■□□□□ 0.99
PPP4R1-215ENST00000580182 IPO5O00410 1097 aaKnown RBP21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 CD2BP2O95400 341 aaKnown RBP21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 CCNE2O96020 404 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 MARK3P27448 753 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 USP11P51784 963 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 PPIGQ13427 754 aaKnown RBP eCLIP21.2■□□□□ 0.982e-10■■□□□ 12.5
PPP4R1-215ENST00000580182 INF2Q27J81 1249 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 EARS2Q5JPH6 523 aaKnown RBP21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 WNT8BQ93098 351 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 VWCEQ96DN2 955 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 LRCH3Q96II8 777 aa21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.982e-13■■■■□ 22.1
PPP4R1-215ENST00000580182 ZNF215Q9UL58 517 aaPredicted RBP21.2■□□□□ 0.98
PPP4R1-215ENST00000580182 C17orf102A2RUQ5 167 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 TDP2O95551 362 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 NONOQ15233 471 aaKnown RBP eCLIP21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 LRIT3Q3SXY7 679 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 TMEM240Q5SV17 173 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 KRT25Q7Z3Z0 450 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 GLG1Q92896 1179 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 GJA10Q969M2 543 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 SETD4Q9NVD3 440 aa21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 TRIP12Q14669 1992 aaPredicted RBP21.19■□□□□ 0.98
PPP4R1-215ENST00000580182 FAM205CA6NFA0 338 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 MSH4O15457 936 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 LGR5O75473 907 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 HOXC8P31273 242 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 NR5A1Q13285 461 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 ZNF365Q70YC5 407 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 IL23AQ9NPF7 189 aa21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 SH2B1Q9NRF2 756 aaPredicted RBP21.18■□□□□ 0.98
PPP4R1-215ENST00000580182 CCDC194A0A1B0GVG4 234 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 PITPNM1O00562 1244 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 TREHO43280 583 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 ATG7O95352 703 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 IQCF3P0C7M6 154 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 PTK7Q13308 1070 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 BFSP2Q13515 415 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 KRT40Q6A162 431 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 PIK3AP1Q6ZUJ8 805 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 RETREG2Q8NC44 543 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 ATP6V0A1Q93050 837 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 LLPHQ9BRT6 129 aaKnown RBP21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 SMARCAD1Q9H4L7 1026 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 ERAP1Q9NZ08 941 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 EMSYQ7Z589 1322 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
PPP4R1-215ENST00000580182 CYP3A7-CYP3A51PA0A087WV96 503 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 ST18O60284 1047 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 CYP3A7P24462 503 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 KRT2P35908 639 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 GUCY1B3Q02153 619 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 LETM2Q2VYF4 491 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 Q4G0T1 1027 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 ABHD15Q6UXT9 468 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 DEFB128Q7Z7B8 93 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 TNFRSF25Q93038 417 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 RNPC3Q96LT9 517 aaKnown RBP21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 AZI2Q9H6S1 392 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 TBC1D22BQ9NU19 505 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 SZT2Q5T011 3432 aa21.16■□□□□ 0.98
PPP4R1-215ENST00000580182 IGKV6D-21A0A0A0MT36 114 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 BTBD18B2RXH4 712 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 MMP1P03956 469 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 CKBP12277 381 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 STAT5BP51692 787 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 ADAM17P78536 824 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 SERINC5Q86VE9 423 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 CCDC60Q8IWA6 550 aaPredicted RBP21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 CCDC155Q8N6L0 562 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 CAGE1Q8TC20 777 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 MBOAT7Q96N66 472 aa21.15■□□□□ 0.98
PPP4R1-215ENST00000580182 LAMA2P24043 3122 aaKnown RBP21.14■□□□□ 0.98
PPP4R1-215ENST00000580182 TANC1Q9C0D5 1861 aa21.14■□□□□ 0.97
PPP4R1-215ENST00000580182 SLC37A4O43826 429 aa21.14■□□□□ 0.97
PPP4R1-215ENST00000580182 RBL2Q08999 1139 aa21.14■□□□□ 0.97
PPP4R1-215ENST00000580182 TRIM29Q14134 588 aa21.14■□□□□ 0.97
PPP4R1-215ENST00000580182 GPNMBQ14956 572 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms