RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CILP2Q8IUL8 1156 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 FAM126BQ8IXS8 530 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 PIP4K2CQ8TBX8 421 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 LEO1Q8WVC0 666 aaPredicted RBP3.52□□□□□ -1.85
COPS3-213ENST00000577210 TOE1Q96GM8 510 aaKnown RBP3.52□□□□□ -1.85
COPS3-213ENST00000577210 SLC38A3Q99624 504 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 TARS2Q9BW92 718 aaKnown RBP3.52□□□□□ -1.85
COPS3-213ENST00000577210 PCIF1Q9H4Z3 704 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 KCNH7Q9NS40 1196 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 PALD1Q9ULE6 856 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 FAN1Q9Y2M0 1017 aa3.52□□□□□ -1.85
COPS3-213ENST00000577210 PTPDC1A2A3K4 754 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 RFXAPO00287 272 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 SGSM2O43147 1006 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 KPNA6O60684 536 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 GLRX3O76003 335 aaKnown RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 KCNA6P17658 529 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 KRT15P19012 456 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 LSSP48449 732 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 FNTBP49356 437 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 KPNA1P52294 538 aaPredicted RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 IRF9Q00978 393 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 PKN1Q16512 942 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 C21orf62-AS1Q17RA5 79 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 RNF219Q5W0B1 726 aaPredicted RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 CC2D1AQ6P1N0 951 aaPredicted RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 TMC6Q7Z403 805 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 NECAB2Q7Z6G3 386 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 ZNF605Q86T29 641 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 RNF180Q86T96 592 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 OSTM1Q86WC4 334 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 EFHBQ8N7U6 833 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 WDR48Q8TAF3 677 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 FAM84AQ96KN4 292 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 TMEM209Q96SK2 561 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 NSUN3Q9H649 340 aaKnown RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 DTLQ9NZJ0 730 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 USP36Q9P275 1121 aaKnown RBP3.51□□□□□ -1.85
COPS3-213ENST00000577210 KLHL14Q9P2G3 628 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 KCNG1Q9UIX4 513 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 FBXL7Q9UJT9 491 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 CBLCQ9ULV8 474 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 COQ6Q9Y2Z9 468 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 COL4A3BPQ9Y5P4 624 aa3.51□□□□□ -1.85
COPS3-213ENST00000577210 TCRBV5S2A0A599 114 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 NFIBO00712 420 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 N4BP3O15049 544 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 TMEM253P0C7T8 217 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 CYP2C8P10632 490 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 COL6A2P12110 1019 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 PTPN1P18031 435 aaKnown RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 GLDCP23378 1020 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 SDHAP31040 664 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 VIPR1P32241 457 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 MECP2P51608 486 aaKnown RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 IL2P60568 153 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 CACNB2Q08289 660 aaPredicted RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 TUSC3Q13454 348 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 ZNF460Q14592 562 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 GPR158Q5T848 1215 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 BTBD8Q5XKL5 378 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 DPP8Q6V1X1 898 aaPredicted RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 PRR23BQ6ZRT6 265 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 PTRH1Q86Y79 214 aaKnown RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 ATL2Q8NHH9 583 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 KCNN1Q92952 543 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 PCGF6Q9BYE7 350 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 PCDH12Q9NPG4 1184 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 TYW1Q9NV66 732 aaKnown RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 RIC8BQ9NVN3 520 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 PPARGC1AQ9UBK2 798 aaKnown RBP3.5□□□□□ -1.85
COPS3-213ENST00000577210 ATP8A1Q9Y2Q0 1164 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 ASB1Q9Y576 335 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 SPO11Q9Y5K1 396 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 B3GALT1Q9Y5Z6 326 aa3.5□□□□□ -1.85
COPS3-213ENST00000577210 IRS2Q9Y4H2 1338 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 TRAF5O00463 557 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 MAN2B1O00754 1011 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 SLC27A2O14975 620 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 NKRFO15226 690 aaKnown RBP eCLIP3.49□□□□□ -1.85
COPS3-213ENST00000577210 BUB1BO60566 1050 aaPredicted RBP3.49□□□□□ -1.85
COPS3-213ENST00000577210 RAB11FIP3O75154 756 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 CHGBP05060 677 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 ENO2P09104 434 aaPredicted RBP3.49□□□□□ -1.85
COPS3-213ENST00000577210 FAHP16930 419 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 CD40P25942 277 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 LSP1P33241 339 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 JAM2P57087 298 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 SESN3P58005 492 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 CAP1Q01518 475 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 DSG1Q02413 1049 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 LRRC32Q14392 662 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 KIR3DS1Q14943 382 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 PAN2Q504Q3 1202 aaKnown RBP3.49□□□□□ -1.85
COPS3-213ENST00000577210 VASNQ6EMK4 673 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 PKN3Q6P5Z2 889 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 ZNF662Q6ZS27 426 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
COPS3-213ENST00000577210 SPATS2Q86XZ4 545 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms