RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 PTK7Q13308 1070 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 ITGB3BPQ13352 177 aaPredicted RBP17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 CAGE1Q8TC20 777 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 WNT8BQ93098 351 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 VWCEQ96DN2 955 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 KCNJ14Q9UNX9 436 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 TREHO43280 583 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 LARGE1O95461 756 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 CYP3A4P08684 503 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 CKBP12277 381 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 SELPP16109 830 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 ACTR2P61160 394 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 SMAD3P84022 425 aaKnown RBP17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 ME3Q16798 604 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 PRR16Q569H4 304 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 GPR153Q6NV75 609 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 HERVK_113Q902F9 699 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 LAMA3Q16787 3333 aa17.74■□□□□ 0.43
AC009088.3-201ENST00000563605 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 CTDNEP1O95476 244 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 THPOP40225 353 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 ZNF618Q5T7W0 954 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 NIPA1Q7RTP0 329 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 ZNF577Q9BSK1 485 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 SMARCAD1Q9H4L7 1026 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
AC009088.3-201ENST00000563605 NFASCO94856 1347 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 GNAT1P11488 350 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 RFC2P35250 354 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 PBX2P40425 430 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 IGBP1P78318 339 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 ZNF697Q5TEC3 545 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 RASIP1Q5U651 963 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 SERINC5Q86VE9 423 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 TBCKQ8TEA7 893 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 PCYT2Q99447 389 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 ERAP1Q9NZ08 941 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 SLC4A7Q9Y6M7 1214 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
AC009088.3-201ENST00000563605 IPO5O00410 1097 aaKnown RBP17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 CCNE2O96020 404 aa17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 PFKMP08237 780 aa17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 ACTN1P12814 892 aa17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 PPFIA1Q13136 1202 aa17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 TRIM71Q2Q1W2 868 aaKnown RBP17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
AC009088.3-201ENST00000563605 BACH1O14867 736 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 DHX15O43143 795 aaKnown RBP17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 EDIL3O43854 480 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 CTSHP09668 335 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 XBP1P17861 261 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 STAT5BP51692 787 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 FOSBP53539 338 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 GPNMBQ14956 572 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 NRCAMQ92823 1304 aa17.7■□□□□ 0.42
AC009088.3-201ENST00000563605 RSPH10B2B2RC85 870 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 NBNO60934 754 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 LGR5O75473 907 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 RSPH10BP0C881 870 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 DNAJB2P25686 324 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 HOXC8P31273 242 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 CIITAP33076 1130 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 USP11P51784 963 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 RABGGTBP53611 331 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 NPY5RQ15761 445 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 GRIK4Q16099 956 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 SWSAP1Q6NVH7 229 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 PHF20Q9BVI0 1012 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 PBX4Q9BYU1 374 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 TTYH1Q9H313 450 aaPredicted RBP17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 TBC1D22BQ9NU19 505 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 STK36Q9NRP7 1315 aa17.69■□□□□ 0.42
AC009088.3-201ENST00000563605 JAK2O60674 1132 aa17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 INSRRP14616 1297 aa17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 ATP2A2P16615 1042 aaKnown RBP17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 RBL2Q08999 1139 aa17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 MBTPS1Q14703 1052 aa17.68■□□□□ 0.42
AC009088.3-201ENST00000563605 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms