RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LONP1P36776 959 aaKnown RBP18.6■□□□□ 0.57
TPM1-219ENST00000559397 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 SLFN12Q8IYM2 578 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 SH3TC2Q8TF17 1288 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 BCAS3Q9H6U6 928 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 PKD2L1Q9P0L9 805 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 KIAA1468Q9P260 1216 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 NFASCO94856 1347 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 PSMD10O75832 226 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 TXNP10599 105 aaKnown RBP18.6■□□□□ 0.57
TPM1-219ENST00000559397 SMPD1P17405 629 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 CCND3P30281 292 aaPredicted RBP18.6■□□□□ 0.57
TPM1-219ENST00000559397 UVSSAQ2YD98 709 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 DUSP28Q4G0W2 176 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
TPM1-219ENST00000559397 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
TPM1-219ENST00000559397 PTGS1P23219 599 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 TNFAIP2Q03169 654 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 NEDD9Q14511 834 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 LRCH2Q5VUJ6 765 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 B3GNT9Q6UX72 402 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 DTHD1Q6ZMT9 781 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 COPS5Q92905 334 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 RIT2Q99578 217 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 VAV3Q9UKW4 847 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
TPM1-219ENST00000559397 GNEQ9Y223 722 aaKnown RBP18.59■□□□□ 0.57
TPM1-219ENST00000559397 SEPT4O43236 478 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 ACTN4O43707 911 aaKnown RBP18.58■□□□□ 0.57
TPM1-219ENST00000559397 MARCH6O60337 910 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 CAVIN2O95810 425 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 AKR1A1P14550 325 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 TXKP42681 527 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.57
TPM1-219ENST00000559397 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.57
TPM1-219ENST00000559397 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.57
TPM1-219ENST00000559397 CNNM3Q8NE01 707 aa18.58■□□□□ 0.57
TPM1-219ENST00000559397 TTC12Q9H892 705 aaPredicted RBP18.58■□□□□ 0.57
TPM1-219ENST00000559397 BRCA2P51587 3418 aa18.58■□□□□ 0.56
TPM1-219ENST00000559397 A0A087X0B3 334 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.561e-6■■□□□ 14
TPM1-219ENST00000559397 GAS7O60861 476 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
TPM1-219ENST00000559397 GGPS1O95749 300 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 SPIRE1Q08AE8 756 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 STX1AQ16623 288 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 CELF3Q5SZQ8 465 aaKnown RBP18.57■□□□□ 0.56
TPM1-219ENST00000559397 CYFIP1Q7L576 1253 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 TUBE1Q9UJT0 475 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 PCDHA12Q9UN75 941 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 FXR2P51116 673 aaKnown RBP eCLIP18.57■□□□□ 0.56
TPM1-219ENST00000559397 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 PPP2R5CQ13362 524 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 KANK3Q6NY19 840 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 METTL7BQ6UX53 244 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
TPM1-219ENST00000559397 TEKT3Q9BXF9 490 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 SERTAD1Q9UHV2 236 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 TELO2Q9Y4R8 837 aa18.57■□□□□ 0.56
TPM1-219ENST00000559397 DDX39AO00148 427 aaKnown RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 SORBS3O60504 671 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 CNGA1P29973 690 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 TECP42680 631 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 ERCC4Q92889 916 aaPredicted RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 LENG1Q96BZ8 264 aaPredicted RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 AK8Q96MA6 479 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 PYM1Q9BRP8 204 aaKnown RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 UNC45AQ9H3U1 944 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 JPH1Q9HDC5 661 aaPredicted RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 HMX1Q9NP08 348 aaPredicted RBP18.56■□□□□ 0.56
TPM1-219ENST00000559397 ANO10Q9NW15 660 aa18.56■□□□□ 0.56
TPM1-219ENST00000559397 DUSP11O75319 330 aaKnown RBP18.55■□□□□ 0.56
TPM1-219ENST00000559397 CCNE2O96020 404 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 GH1P01241 217 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 LAMC2Q13753 1193 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 E2F4Q16254 413 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 SH3RF1Q7Z6J0 888 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
TPM1-219ENST00000559397 IGSF22Q8N9C0 903 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 CCSER1Q9C0I3 900 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 MLXIPQ9HAP2 919 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 SLC9A2Q9UBY0 812 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 HOOK1Q9UJC3 728 aaKnown RBP18.55■□□□□ 0.56
TPM1-219ENST00000559397 Q9Y3F1 56 aa18.55■□□□□ 0.56
TPM1-219ENST00000559397 PDIA5Q14554 519 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 ZNF746Q6NUN9 644 aaPredicted RBP18.54■□□□□ 0.56
TPM1-219ENST00000559397 PDILTQ8N807 584 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 ARMC5Q96C12 935 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
TPM1-219ENST00000559397 DDX20Q9UHI6 824 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms