RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ANKS1AQ92625 1134 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 CHMP4CQ96CF2 233 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 OSBPL2Q9H1P3 480 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 RNF146Q9NTX7 359 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ASB14A6NK59 587 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 GIPC1O14908 333 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 CPNE3O75131 537 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 DUSP11O75319 330 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 PDHBP11177 359 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ALAS1P13196 640 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 SYN1P17600 705 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 IRX6P78412 446 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 SNX17Q15036 470 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 C8orf34Q49A92 452 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 TSEN34Q9BSV6 310 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 KRT23Q9C075 422 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 HOMER2Q9NSB8 354 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF232Q9UNY5 417 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 PHF24Q9UPV7 400 aa11.48□□□□□ -0.57
HNRNPC-228ENST00000557033 RAD50Q92878 1312 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 ATF4P18848 351 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 SLC16A2P36021 539 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 GPATCH4Q5T3I0 446 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 ARMCX2Q7L311 632 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 TREML1Q86YW5 311 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 FGD4Q96M96 766 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 OSBPL7Q9BZF2 842 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 C12orf49Q9H741 205 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 CYP39A1Q9NYL5 469 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
HNRNPC-228ENST00000557033 NEDD4P46934 1319 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 LOC102724159A0A0B4J2E5 919 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 ADAMTS4O75173 837 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 PGK1P00558 417 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 RPLP1P05386 114 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 CHMLP26374 656 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 MAGEA10P43363 369 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 RTP1P59025 263 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 SNAP25P60880 206 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 NKX3-2P78367 333 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 TTC16Q8NEE8 873 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 ZSCAN10Q96SZ4 725 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 LBHD1Q9BQE6 289 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 PHACTR1Q9C0D0 580 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 MAF1Q9H063 256 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 KAT14Q9H8E8 782 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 SPC25Q9HBM1 224 aa11.46□□□□□ -0.57
HNRNPC-228ENST00000557033 LAMA4Q16363 1823 aa11.46□□□□□ -0.58
HNRNPC-228ENST00000557033 WDR19Q8NEZ3 1342 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 B4E1Z4 1266 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 ACLYP53396 1101 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 GJA9P57773 515 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 MUM1L1Q5H9M0 696 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 RASGRP2Q7LDG7 609 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 SPACA7Q96KW9 195 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 UBE2OQ9C0C9 1292 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 KATNBL1Q9H079 304 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 ADD3Q9UEY8 706 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 ATP11BQ9Y2G3 1177 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 CEP290O15078 2479 aa11.45□□□□□ -0.58
HNRNPC-228ENST00000557033 DNAH12Q6ZR08 3092 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 A6NHS1 94 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 TRDNQ13061 729 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 NR5A1Q13285 461 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 KCNA10Q16322 511 aa11.44□□□□□ -0.58
HNRNPC-228ENST00000557033 LRIT3Q3SXY7 679 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms