RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TRIM48Q8IWZ4 208 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 UBR7Q8N806 425 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 SMC1BQ8NDV3 1235 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 OR2W6PQ8NHA6 318 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 LEO1Q8WVC0 666 aaPredicted RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 BOCQ9BWV1 1114 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 FAM126AQ9BYI3 521 aaPredicted RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 FAM53CQ9NYF3 392 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 TELO2Q9Y4R8 837 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 PCDHB4Q9Y5E5 795 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 ADAMTSL3P82987 1691 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 PTPDC1A2A3K4 754 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 ZNF891A8MT65 544 aaPredicted RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 SLC27A2O14975 620 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 ZEB2O60315 1214 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 PEX10O60683 326 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 CPEP16870 476 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 FBLN1P23142 703 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 CNGA1P29973 690 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 GJA4P35212 333 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 SCNN1BP51168 640 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 PRR5P85299 388 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 NFKB2Q00653 900 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 CT47A1Q5JQC4 288 aaPredicted RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 MILR1Q7Z6M3 343 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 PTRH1Q86Y79 214 aaKnown RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 NXPE1Q8N323 547 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 DLG3Q92796 817 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 LIN37Q96GY3 246 aaPredicted RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 PUS7Q96PZ0 661 aaKnown RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.71□□□□□ -1.66
SRP54-209ENST00000555746 RXFP1Q9HBX9 757 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.71□□□□□ -1.66
SRP54-209ENST00000555746 HSPBP1Q9NZL4 362 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 DBR1Q9UK59 544 aaKnown RBP4.71□□□□□ -1.66
SRP54-209ENST00000555746 ZKSCAN5Q9Y2L8 839 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 ATP8A1Q9Y2Q0 1164 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 B3GALT1Q9Y5Z6 326 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 HCFC2Q9Y5Z7 792 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 IRS2Q9Y4H2 1338 aa4.71□□□□□ -1.66
SRP54-209ENST00000555746 BRINP1O60477 761 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 GAS7O60861 476 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 ATP2A2P16615 1042 aaKnown RBP4.7□□□□□ -1.66
SRP54-209ENST00000555746 TAL1P17542 331 aaPredicted RBP4.7□□□□□ -1.66
SRP54-209ENST00000555746 KRT15P19012 456 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 ADCYAP1R1P41586 468 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 IRF9Q00978 393 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 TUSC3Q13454 348 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 SKOR2Q2VWA4 1001 aaPredicted RBP4.7□□□□□ -1.66
SRP54-209ENST00000555746 MPZL3Q6UWV2 235 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 AMIGO3Q86WK7 504 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 DDX42Q86XP3 938 aaKnown RBP eCLIP4.7□□□□□ -1.66
SRP54-209ENST00000555746 FAM126BQ8IXS8 530 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 ARRDC4Q8NCT1 418 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 CLEC4DQ8WXI8 215 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 CD244Q9BZW8 370 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 IFT22Q9H7X7 185 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 MCM8Q9UJA3 840 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 ATP23Q9Y6H3 246 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 LTBP4Q8N2S1 1624 aa4.7□□□□□ -1.66
SRP54-209ENST00000555746 MAGI1Q96QZ7 1491 aaPredicted RBP4.69□□□□□ -1.66
SRP54-209ENST00000555746 TOPBP1Q92547 1522 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 hCG_2014768A0A024R1R8 64 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 FAM90A27PA6NNH2 459 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 DVL2O14641 736 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 LTFP02788 710 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 PTPN1P18031 435 aaKnown RBP4.69□□□□□ -1.66
SRP54-209ENST00000555746 PMLP29590 882 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 SDHAP31040 664 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 VIPR1P32241 457 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 LSSP48449 732 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 IGBP1P78318 339 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 OCRLQ01968 901 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 STRN3Q13033 797 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 FSTL4Q6MZW2 842 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 CC2D1AQ6P1N0 951 aaPredicted RBP4.69□□□□□ -1.66
SRP54-209ENST00000555746 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 TMC6Q7Z403 805 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 ANKRD13AQ8IZ07 590 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 RPUSD2Q8IZ73 545 aaKnown RBP4.69□□□□□ -1.66
SRP54-209ENST00000555746 EFHBQ8N7U6 833 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 CPA5Q8WXQ8 436 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 USP7Q93009 1102 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 TTC1Q99614 292 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 RNF38Q9H0F5 515 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 KCNH7Q9NS40 1196 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 DTLQ9NZJ0 730 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 APOBEC2Q9Y235 224 aaKnown RBP4.69□□□□□ -1.66
SRP54-209ENST00000555746 SPO11Q9Y5K1 396 aa4.69□□□□□ -1.66
SRP54-209ENST00000555746 PHLDB1Q86UU1 1377 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 TEX51A0A1B0GUA7 166 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 MYOCOSA0A1B0GUC4 107 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 H7C1D1 291 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 ACOT7O00154 380 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 NEMP1O14524 444 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 KCNK3O14649 394 aa4.68□□□□□ -1.66
SRP54-209ENST00000555746 BUB1BO60566 1050 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms