RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FEZ1Q99689 392 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 PARD6AQ9NPB6 346 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 DSEQ9UL01 958 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 CBLCQ9ULV8 474 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 TELO2Q9Y4R8 837 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 A0A1B0GTL3 188 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 TCRBV5S4A2TA0A5A2 114 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 CCDC66A2RUB6 948 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 LTFP02788 710 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 PYGMP11217 842 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 SDSP20132 328 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 ADAM9Q13443 819 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 GPR19Q15760 415 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 PRR31Q5SQ13 230 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 KCTD1Q719H9 257 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 C16orf59Q7L2K0 433 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-213ENST00000554776 PROSER1Q86XN7 944 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 ZC3H7AQ8IWR0 971 aaKnown RBP4.49□□□□□ -1.69
SCFD1-213ENST00000554776 RBM12BQ8IXT5 1001 aaKnown RBP4.49□□□□□ -1.69
SCFD1-213ENST00000554776 CARFQ8N187 725 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 SH3RF2Q8TEC5 729 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 CELF4Q9BZC1 486 aaKnown RBP4.49□□□□□ -1.69
SCFD1-213ENST00000554776 XYLT2Q9H1B5 865 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 ZCCHC4Q9H5U6 513 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 NTMQ9P121 344 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 WASF3Q9UPY6 502 aa4.49□□□□□ -1.69
SCFD1-213ENST00000554776 ARID1BQ8NFD5 2236 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 ZNF561-AS1K7EIQ3 104 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SASH1O94885 1247 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 AMY2AP04746 511 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SRGAP2CP0DJJ0 459 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 FAHP16930 419 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 AMY2BP19961 511 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 HOXA5P20719 270 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 RPL13P26373 211 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 KCNC1P48547 511 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SARSP49591 514 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 GRIN1Q05586 938 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 ZNF460Q14592 562 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 PAN2Q504Q3 1202 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 DALRD3Q5D0E6 543 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 TTLL7Q6ZT98 887 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 STK32CQ86UX6 486 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 NINJ1Q92982 152 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SMURF1Q9HCE7 757 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 SRPK3Q9UPE1 567 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 COQ6Q9Y2Z9 468 aa4.48□□□□□ -1.69
SCFD1-213ENST00000554776 TNPO3Q9Y5L0 923 aaKnown RBP4.48□□□□□ -1.69
SCFD1-213ENST00000554776 FAM83GA6ND36 823 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 OTOL1A6NHN0 477 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-213ENST00000554776 MAN2B1O00754 1011 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 GSTA4O15217 222 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 CLSTN1O94985 981 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 ASLP04424 464 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 PDE6AP16499 860 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 IGFALSP35858 605 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 GYS2P54840 703 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 ST5P78524 1137 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 LACTBP83111 547 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-213ENST00000554776 FAM47CQ5HY64 1035 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 ZCCHC8Q6NZY4 707 aaKnown RBP4.47□□□□□ -1.69
SCFD1-213ENST00000554776 ARHGAP36Q6ZRI8 547 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 OVCH1Q7RTY7 1134 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 NIM1KQ8IY84 436 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 NLGN4XQ8N0W4 816 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 FEZF2Q8TBJ5 459 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 GPATCH3Q96I76 525 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 TMEM209Q96SK2 561 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 SPATA25Q9BR10 227 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 CD244Q9BZW8 370 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 CATSPERZQ9NTU4 200 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 MAGEC2Q9UBF1 373 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-213ENST00000554776 PLAAQ9Y263 795 aa4.47□□□□□ -1.69
SCFD1-213ENST00000554776 ADAMTS20P59510 1910 aa4.46□□□□□ -1.69
SCFD1-213ENST00000554776 A0A0G2JLL6 359 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 ACOT7O00154 380 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 GLRX3O76003 335 aaKnown RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 NPTXRO95502 500 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 HSP90B1P14625 803 aaKnown RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 ZNF28P17035 718 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 DNM2P50570 870 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 MECP2P51608 486 aaKnown RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 JAM2P57087 298 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 RTP5Q14D33 572 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 CRY1Q16526 586 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 FIGNQ5HY92 759 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 FSTL4Q6MZW2 842 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 TMC5Q6UXY8 1006 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 FILIP1Q7Z7B0 1213 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 OSTM1Q86WC4 334 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 PTRH1Q86Y79 214 aaKnown RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.7
SCFD1-213ENST00000554776 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 DTX3Q8N9I9 347 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 C20orf173Q96LM9 149 aa4.46□□□□□ -1.7
SCFD1-213ENST00000554776 CLIC6Q96NY7 704 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms