RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
MRPS35-204ENST00000542199 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
MRPS35-204ENST00000542199 OVOS2A0A0G2JMS6 1433 aa11.02□□□□□ -0.64
MRPS35-204ENST00000542199 OVOS2A0A0J9YW53 1432 aa11.02□□□□□ -0.64
MRPS35-204ENST00000542199 OVOS2Q6IE36 1432 aa11.02□□□□□ -0.64
MRPS35-204ENST00000542199 USP54Q70EL1 1684 aa11.02□□□□□ -0.64
MRPS35-204ENST00000542199 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.65
MRPS35-204ENST00000542199 LAPTM5Q13571 262 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 DDB1Q16531 1140 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 KCNT2Q6UVM3 1135 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 TMEM59LQ9UK28 342 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 TRAF6Q9Y4K3 522 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 UTRNP46939 3433 aa11.02□□□□□ -0.65
MRPS35-204ENST00000542199 BCL9O00512 1426 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
MRPS35-204ENST00000542199 HYAL3O43820 417 aaPredicted RBP11.01□□□□□ -0.65
MRPS35-204ENST00000542199 WNT11O96014 354 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 PAMP19021 973 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 ENDOUP21128 410 aaKnown RBP11.01□□□□□ -0.65
MRPS35-204ENST00000542199 HK2P52789 917 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 PLCL1Q15111 1095 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 TCEA2Q15560 299 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 INF2Q27J81 1249 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
MRPS35-204ENST00000542199 TP53INP2Q8IXH6 220 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 LINC01599Q8WXQ3 324 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 CLUHP3Q96NS8 147 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 FEZ1Q99689 392 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
MRPS35-204ENST00000542199 LRRC37A3O60309 1634 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 CCDC163A0A0D9SF12 145 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 NPHP3-ACAD11A0A0J9YXS1 232 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 LCP1P13796 627 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 R3HDM1Q15032 1099 aaKnown RBP11□□□□□ -0.65
MRPS35-204ENST00000542199 CYP2R1Q6VVX0 501 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
MRPS35-204ENST00000542199 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 NDOR1Q9UHB4 597 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 USP47Q96K76 1375 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 CCDC7Q96M83 1385 aa11□□□□□ -0.65
MRPS35-204ENST00000542199 LRP5O75197 1615 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 SCO2A0A1W2PP80 73 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 SLC23A3Q6PIS1 610 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 SLC7A14Q8TBB6 771 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 PI4K2BQ8TCG2 481 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 SYTL4Q96C24 671 aaPredicted RBP10.99□□□□□ -0.65
MRPS35-204ENST00000542199 PHF20Q9BVI0 1012 aa10.99□□□□□ -0.65
MRPS35-204ENST00000542199 MBNL3Q9NUK0 354 aaKnown RBP10.99□□□□□ -0.65
MRPS35-204ENST00000542199 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
MRPS35-204ENST00000542199 FADS2P1A8MWK0 482 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 PLD2O14939 933 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 MSCO60682 206 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
MRPS35-204ENST00000542199 DIO2Q92813 273 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 MRPL4Q9BYD3 311 aaKnown RBP10.98□□□□□ -0.65
MRPS35-204ENST00000542199 SFMBT1Q9UHJ3 866 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 NPFFR2Q9Y5X5 522 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
MRPS35-204ENST00000542199 PLSCR1O15162 318 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 TBC1D8O95759 1140 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 LTBRP36941 435 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 ERVFC1P60507 584 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 DUSP4Q13115 394 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 KCNAB2Q13303 367 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
MRPS35-204ENST00000542199 TESK1Q15569 626 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
MRPS35-204ENST00000542199 STYK1Q6J9G0 422 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 SYNPOQ8N3V7 929 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 DCAF4Q8WV16 495 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 MMP19Q99542 508 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 TNS2Q63HR2 1409 aa10.97□□□□□ -0.65
MRPS35-204ENST00000542199 RREB1Q92766 1687 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 EXOC5O00471 708 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 EFEMP2O95967 443 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 GYS2P54840 703 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 GABREP78334 506 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 TMF1P82094 1093 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 CEP128Q6ZU80 1094 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 BRAPQ7Z569 592 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 RCBTB1Q8NDN9 531 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 IP6K1Q92551 441 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 PTPRN2Q92932 1015 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 TNFRSF10DQ9UBN6 386 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 FBXL7Q9UJT9 491 aa10.96□□□□□ -0.65
MRPS35-204ENST00000542199 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 ZNF792Q3KQV3 632 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
MRPS35-204ENST00000542199 AGBL5Q8NDL9 886 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 COG3Q96JB2 828 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 TRIM39Q9HCM9 518 aa10.95□□□□□ -0.66
MRPS35-204ENST00000542199 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms