RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SUGCTQ9HAC7 445 aa16.25■□□□□ 0.19
SNHG1-213ENST00000540725 INSL6Q9Y581 213 aa16.25■□□□□ 0.19
SNHG1-213ENST00000540725 LOXHD1Q8IVV2 1947 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 hCG_1642624A0A1W2PR95 340 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 ADAM17P78536 824 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 ARHGAP4P98171 946 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 LMBR1Q8WVP7 490 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 HLA-CQ95604 372 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 CDHR1Q96JP9 859 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 OSBPL7Q9BZF2 842 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 SLC12A7Q9Y666 1083 aa16.24■□□□□ 0.19
SNHG1-213ENST00000540725 RALGAPA2Q2PPJ7 1873 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 ATP9AO75110 1047 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 KCNA2P16389 499 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 TCF7P36402 384 aaPredicted RBP16.23■□□□□ 0.19
SNHG1-213ENST00000540725 HTRA4P83105 476 aaPredicted RBP16.23■□□□□ 0.19
SNHG1-213ENST00000540725 UBE2SQ16763 222 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
SNHG1-213ENST00000540725 NRCAMQ92823 1304 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 ITGB5P18084 799 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 SP7Q8TDD2 431 aaPredicted RBP16.22■□□□□ 0.19
SNHG1-213ENST00000540725 C17orf80Q9BSJ5 609 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 UBIAD1Q9Y5Z9 338 aa16.22■□□□□ 0.19
SNHG1-213ENST00000540725 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 MTMR1Q13613 665 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 FAM26DQ5JW98 314 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 SEPT1Q8WYJ6 367 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 TTC3P53804 2025 aa16.21■□□□□ 0.19
SNHG1-213ENST00000540725 COL4A6Q14031 1691 aa16.21■□□□□ 0.18
SNHG1-213ENST00000540725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.2■□□□□ 0.18
SNHG1-213ENST00000540725 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 UPP2O95045 317 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 SYNE3Q6ZMZ3 975 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 RUFY4Q6ZNE9 571 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 APBB2Q92870 758 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 YME1L1Q96TA2 773 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
SNHG1-213ENST00000540725 PCDHA6Q9UN73 950 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 PCDHA8Q9Y5H6 950 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 ATG2AQ2TAZ0 1938 aa16.2■□□□□ 0.18
SNHG1-213ENST00000540725 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 COL9A1P20849 921 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 MARK3P27448 753 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 RNF20Q5VTR2 975 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 TAF2Q6P1X5 1199 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 RPAINQ86UA6 219 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 GLG1Q92896 1179 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 SAMD11Q96NU1 681 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 EHMT1Q9H9B1 1298 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 ERAP1Q9NZ08 941 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 TUBE1Q9UJT0 475 aa16.19■□□□□ 0.18
SNHG1-213ENST00000540725 MAFGO15525 162 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 CHRNA1P02708 482 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 GHRP10912 638 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 GRIK4Q16099 956 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 SMARCAD1Q9H4L7 1026 aa16.18■□□□□ 0.18
SNHG1-213ENST00000540725 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
SNHG1-213ENST00000540725 EVPLQ92817 2033 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
SNHG1-213ENST00000540725 NAPAP54920 295 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 MGAT3Q09327 533 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 RSPH3Q86UC2 560 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 MRPL38Q96DV4 380 aaKnown RBP16.17■□□□□ 0.18
SNHG1-213ENST00000540725 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
SNHG1-213ENST00000540725 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
SNHG1-213ENST00000540725 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
SNHG1-213ENST00000540725 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
SNHG1-213ENST00000540725 ZBTB43O43298 467 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
SNHG1-213ENST00000540725 LPIN1Q14693 890 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 RTN1Q16799 776 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 TYW1BQ6NUM6 668 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 PPP1R18Q6NYC8 613 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 DNAJB3Q8WWF6 145 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 RIC8AQ9NPQ8 531 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
SNHG1-213ENST00000540725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.15■□□□□ 0.18
SNHG1-213ENST00000540725 H3BNC9 293 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms