RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	PKD2L1	Q9P0L9	805 aa		27.65	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	TRAF5	O00463	557 aa		27.65	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	HERVK_113	P62684	666 aa		27.65	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	TRIM47	Q96LD4	638 aa		27.65	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	TESPA1	A2RU30	521 aa	Predicted RBP	27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	TRIM49B	A6NDI0	452 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	DDX39A	O00148	427 aa	Known RBP	27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	OSBP	P22059	807 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	ITGB3BP	Q13352	177 aa	Predicted RBP	27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	MOGS	Q13724	837 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	ARSH	Q5FYA8	562 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	TTI2	Q6NXR4	508 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	MIER3	Q7Z3K6	550 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	NLRX1	Q86UT6	975 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	GUF1	Q8N442	669 aa	Known RBP	27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	ANKRD20A12P	Q8NF67	263 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	NOC3L	Q8WTT2	800 aa	Known RBP	27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	GPRASP2	Q96D09	838 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	SPATC1L	Q9H0A9	340 aa		27.64	■■■□□ 2.02
ARL6IP4-218	ENST00000540708	PFAS	O15067	1338 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	PMS1	P54277	932 aa	Known RBP	27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	SNAPC2	Q13487	334 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	VSTM4	Q8IW00	320 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	INTS13	Q9NVM9	706 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708		A0A1B0GTH6	734 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	MAFG	O15525	162 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	FILIP1L	Q4L180	1135 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	FAM26F	Q5R3K3	315 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	ANKRD35	Q8N283	1001 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	NACC1	Q96RE7	527 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	BHMT2	Q9H2M3	363 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	THAP9	Q9H5L6	903 aa		27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	LIMA1	Q9UHB6	759 aa	Known RBP	27.63	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.62	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	STAM2	O75886	525 aa		27.62	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	APTX	Q7Z2E3	356 aa	Known RBP	27.62	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	RRAGC	Q9HB90	399 aa		27.62	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	FRMD3	A2A2Y4	597 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	GJA5	P36382	358 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	FKBP1B	P68106	108 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	NR1I3	Q14994	352 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	DNER	Q8NFT8	737 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CACTIN	Q8WUQ7	758 aa	Known RBP	27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	INPP4A	Q96PE3	977 aa	Predicted RBP	27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	PAGR1	Q9BTK6	254 aa		27.61	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	KCNJ18	B7U540	433 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	ZNF500	O60304	480 aa	Predicted RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	GIT2	Q14161	759 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	KCNJ12	Q14500	433 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	TCP11X2	Q5H9J9	407 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CENPP	Q6IPU0	288 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	GPAT2	Q6NUI2	795 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	LRRC8A	Q8IWT6	810 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	PIGO	Q8TEQ8	1089 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	IWS1	Q96ST2	819 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	LXN	Q9BS40	222 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	TCEAL9	Q9UHQ7	104 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	P4HB	P07237	508 aa	Known RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CLCN1	P35523	988 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	COPB2	P35606	906 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	ANKRD40	Q6AI12	368 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	NCAPG2	Q86XI2	1143 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CSGALNACT2	Q8N6G5	542 aa		27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	DUSP9	Q99956	384 aa	Known RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	SRRT	Q9BXP5	876 aa	Known RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	ADD3	Q9UEY8	706 aa	Known RBP	27.6	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	LRRC10B	A6NIK2	292 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	PEX10	O60683	326 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CNMD	O75829	334 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	SLC25A27	O95847	323 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CACNB1	Q02641	598 aa	Predicted RBP	27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	RAD51AP2	Q09MP3	1159 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	KRT31	Q15323	416 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	MYOCD	Q8IZQ8	938 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CCDC150	Q8NCX0	1101 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	CDHR1	Q96JP9	859 aa		27.59	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	EEF1G	P26641	437 aa	Known RBP	27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	KRT76	Q01546	638 aa		27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	BANK1	Q8NDB2	785 aa		27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	REEP2	Q9BRK0	252 aa		27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	SEMA6B	Q9H3T3	888 aa		27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	MAGEC2	Q9UBF1	373 aa	Predicted RBP	27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	SAMM50	Q9Y512	469 aa		27.58	■■■□□ 2.01
ARL6IP4-218	ENST00000540708	ATP9A	O75110	1047 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	KIF20A	O95235	890 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	SFN	P31947	248 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	JAK3	P52333	1124 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	LRMP	Q12912	555 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	RINT1	Q6NUQ1	792 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	IRF2BP1	Q8IU81	584 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	RUSC1	Q9BVN2	902 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	ZHX3	Q9H4I2	956 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	ZSWIM4	Q9H7M6	989 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	RTN4	Q9NQC3	1192 aa	Known RBP	27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	PCDHA2	Q9Y5H9	948 aa		27.58	■■■□□ 2
ARL6IP4-218	ENST00000540708	GNPTAB	Q3T906	1256 aa		27.57	■■■□□ 2
ARL6IP4-218	ENST00000540708	FOXR2	Q6PJQ5	311 aa		27.57	■■■□□ 2
ARL6IP4-218	ENST00000540708	FAM114A1	Q8IWE2	563 aa		27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 227 ms