RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 IFNL3Q8IZI9 196 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 NSUN6Q8TEA1 469 aaKnown RBP12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 MAP1BP46821 2468 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 H3BRB1 525 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 M0R2C6 588 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 PPFIA4O75335 1185 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 GGPS1O95749 300 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 CHRNA1P02708 482 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 MYCLP12524 364 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 AOC1P19801 751 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 ERVFC1P60507 584 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 PPARAQ07869 468 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-234ENST00000522227 ZFHX4Q86UP3 3567 aa12.96□□□□□ -0.34
CTNNA1-234ENST00000522227 KIAA1217Q5T5P2 1943 aa12.96□□□□□ -0.34
CTNNA1-234ENST00000522227 CEP250Q9BV73 2442 aa12.96□□□□□ -0.34
CTNNA1-234ENST00000522227 CAND2O75155 1236 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 NPR3P17342 541 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 LPIN1Q14693 890 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 CELF3Q5SZQ8 465 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 MYSM1Q5VVJ2 828 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 RUBCNQ92622 972 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 APPBP2Q92624 585 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 DNAH14Q0VDD8 3507 aa12.95□□□□□ -0.34
CTNNA1-234ENST00000522227 CFAP47Q6ZTR5 3102 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 LGALS2P05162 132 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 NR3C2P08235 984 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 RLBP1P12271 317 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 RUFY4Q6ZNE9 571 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 SIX5Q8N196 739 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 LINC01599Q8WXQ3 324 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 CDCA3Q99618 268 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 NAPBQ9H115 298 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 HCSTQ9UBK5 93 aa12.94□□□□□ -0.34
CTNNA1-234ENST00000522227 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 GOLGA8HP0CJ92 632 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 GNAT2P19087 354 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 RFX1P22670 979 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 SP2Q02086 613 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 UTP14CQ5TAP6 766 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 TRIM50Q86XT4 487 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 TDRD5Q8NAT2 981 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 RTP3Q9BQQ7 232 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 ERVK-5Q9HDB9 667 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 PCDHB12Q9Y5F1 795 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 TTC3P53804 2025 aa12.93□□□□□ -0.34
CTNNA1-234ENST00000522227 WDR19Q8NEZ3 1342 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 FGF18O76093 207 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 GNAT1P11488 350 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 HOXC8P31273 242 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 CD52P31358 61 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 RRP12Q5JTH9 1297 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 KIAA0319Q5VV43 1072 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 RTN4RL1Q86UN2 441 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 EHMT1Q9H9B1 1298 aa12.92□□□□□ -0.34
CTNNA1-234ENST00000522227 ENTPD7Q9NQZ7 604 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms