RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 STXBP3O00186 592 aa29.66■■■□□ 2.34
LAPTM4B-203ENST00000521545 LGR5O75473 907 aa29.66■■■□□ 2.34
LAPTM4B-203ENST00000521545 TYW1BQ6NUM6 668 aa29.66■■■□□ 2.34
LAPTM4B-203ENST00000521545 COL25A1Q9BXS0 654 aaPredicted RBP29.66■■■□□ 2.34
LAPTM4B-203ENST00000521545 CAND2O75155 1236 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 PSMA5P28066 241 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 ADD1P35611 737 aaKnown RBP29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 ARHGAP4P98171 946 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 MBTPS1Q14703 1052 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 BRF1Q92994 677 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 MXRA8Q9BRK3 442 aa29.65■■■□□ 2.34
LAPTM4B-203ENST00000521545 PRUNE2Q8WUY3 3088 aa29.64■■■□□ 2.34
LAPTM4B-203ENST00000521545 CCDC85BQ15834 202 aaPredicted RBP29.64■■■□□ 2.34
LAPTM4B-203ENST00000521545 GLG1Q92896 1179 aa29.64■■■□□ 2.34
LAPTM4B-203ENST00000521545 NRCAMQ92823 1304 aa29.64■■■□□ 2.34
LAPTM4B-203ENST00000521545 GSTTP1A0A1W2PQM5 241 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 DEFB103AP81534 67 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 AP3B2Q13367 1082 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 PGBD1Q96JS3 809 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 ANO3Q9BYT9 981 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 SMARCAD1Q9H4L7 1026 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 CERS4Q9HA82 394 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 ERAP1Q9NZ08 941 aa29.63■■■□□ 2.33
LAPTM4B-203ENST00000521545 RPS6KB1P23443 525 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 TAP1Q03518 808 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 PFKFB3Q16875 520 aaPredicted RBP29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 TCTN1Q2MV58 587 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 DBF4BQ8NFT6 615 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 LMBR1Q8WVP7 490 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 JPH1Q9HDC5 661 aaPredicted RBP29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 KCNH7Q9NS40 1196 aa29.62■■■□□ 2.33
LAPTM4B-203ENST00000521545 CTSHP09668 335 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 ZNF76P36508 570 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 CEP55Q53EZ4 464 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 ARNTL2Q8WYA1 636 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 RAD9AQ99638 391 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 SDF4Q9BRK5 362 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 SLC9A2Q9UBY0 812 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 CUL9Q8IWT3 2517 aa29.61■■■□□ 2.33
LAPTM4B-203ENST00000521545 GTPBP6O43824 516 aaPredicted RBP29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 SCG2P13521 617 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 ADAM17P78536 824 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 AKAP17AQ02040 695 aaKnown RBP29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 PPFIA1Q13136 1202 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 PLEKHG4Q58EX7 1191 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 TMCO2Q7Z6W1 182 aaPredicted RBP29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 FBXL16Q8N461 479 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 CYP2W1Q8TAV3 490 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 CCDC12Q8WUD4 166 aaPredicted RBP29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 SEPT8Q92599 483 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 TMEM260Q9NX78 707 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 CHD7Q9P2D1 2997 aa29.6■■■□□ 2.33
LAPTM4B-203ENST00000521545 KAT6AQ92794 2004 aa29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 GJB5O95377 273 aa29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 MARK3P27448 753 aa29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 MICALL1Q8N3F8 863 aa29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 SYMPKQ92797 1274 aaKnown RBP29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 AZI2Q9H6S1 392 aa29.59■■■□□ 2.33
LAPTM4B-203ENST00000521545 RFXAPO00287 272 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 NFASCO94856 1347 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 AMHP03971 560 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 SREBF1P36956 1147 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 CLK2P49760 499 aaKnown RBP29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 TAF2Q6P1X5 1199 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 RSPH3Q86UC2 560 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 TNPO1Q92973 898 aaKnown RBP29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 TSPYL2Q9H2G4 693 aaPredicted RBP29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 C6orf50Q9HD87 102 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 PRDM6Q9NQX0 595 aa29.58■■■□□ 2.33
LAPTM4B-203ENST00000521545 PRPF3O43395 683 aaKnown RBP29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 EPB41L2O43491 1005 aaKnown RBP29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 ARHGEF15O94989 841 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 ARP10275 920 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 GRIK4Q16099 956 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 JAKMIP3Q5VZ66 844 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 MCTP2Q6DN12 878 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 FAM117BQ6P1L5 589 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 AGXT2Q9BYV1 514 aa29.57■■■□□ 2.32
LAPTM4B-203ENST00000521545 MEIS1O00470 390 aa29.56■■■□□ 2.32
LAPTM4B-203ENST00000521545 FAM26DQ5JW98 314 aa29.56■■■□□ 2.32
LAPTM4B-203ENST00000521545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.56■■■□□ 2.322e-8■■■■■ 27.3
LAPTM4B-203ENST00000521545 AGO4Q9HCK5 861 aaKnown RBP29.56■■■□□ 2.32
LAPTM4B-203ENST00000521545 THEGQ9P2T0 379 aa29.56■■■□□ 2.32
LAPTM4B-203ENST00000521545 PTPRSQ13332 1948 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 NID2Q14112 1375 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 ESYT2A0FGR8 921 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 LCHNA4D1U4 455 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 POU3F3P20264 500 aaPredicted RBP29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 ACTR2P61160 394 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 TJAP1Q5JTD0 557 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 NIPA1Q7RTP0 329 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 MYOCDQ8IZQ8 938 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 ATXN2LQ8WWM7 1075 aaKnown RBP29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 ZMYND12Q9H0C1 365 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 TUBE1Q9UJT0 475 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 INSL6Q9Y581 213 aa29.55■■■□□ 2.32
LAPTM4B-203ENST00000521545 EPOPA6NHQ4 379 aa29.54■■■□□ 2.32
LAPTM4B-203ENST00000521545 RRN3P2A6NIE6 340 aa29.54■■■□□ 2.32
LAPTM4B-203ENST00000521545 GNA11P29992 359 aa29.54■■■□□ 2.32
LAPTM4B-203ENST00000521545 RUFY4Q6ZNE9 571 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms