RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 KRIT1O00522 736 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 STAT3P40763 770 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 GUCY2DQ02846 1103 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 CASP8Q14790 479 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 TERF2Q15554 542 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 ECE2O60344 883 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 PDIA5Q14554 519 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 RCSD1Q6JBY9 416 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 WDR11Q9BZH6 1224 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 ATP2C2O75185 946 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 A0A087X0B3 334 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 ZNF18P17022 549 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SFR1Q86XK3 245 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 KRT12Q99456 494 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 MYMKA6NI61 221 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 IWS1Q96ST2 819 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SELENOSQ9BQE4 189 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SYNCQ9H7C4 482 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SRGNP10124 158 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 PRKG1Q13976 671 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 GSTA5Q7RTV2 222 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 CHRNA5P30532 468 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 ARHGEF16Q5VV41 709 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 PDXDC2PQ6P474 469 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
PCDHGB4-201ENST00000519479 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 AOC3Q16853 763 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 TBC1D10BQ4KMP7 808 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 GYS2P54840 703 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 STRN3Q13033 797 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 CEP63Q96MT8 703 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 TRIM10Q9UDY6 481 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 GFPT2O94808 682 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 FERP16591 822 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 CEP72Q9P209 647 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 POLLQ9UGP5 575 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 CSADQ9Y600 493 aa12.31□□□□□ -0.44
PCDHGB4-201ENST00000519479 ANO9A1A5B4 782 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 BMP6P22004 513 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 USP11P51784 963 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 MYL7Q01449 175 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 CCDC114Q96M63 670 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 POLRMTO00411 1230 aaKnown RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 NAA35Q5VZE5 725 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 CPLX4Q7Z7G2 160 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 EPB41L5Q9HCM4 733 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms