RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 KIF3AQ9Y496 699 aa15.4■□□□□ 0.06
FDPS-219ENST00000495308 DCDC2CA8MYV0 355 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 H3BRB1 525 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 HAS3O00219 553 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 B4GALT4O60513 344 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 CCNE2O96020 404 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 CLTBP09497 229 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 ACTR2P61160 394 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 GNL2Q13823 731 aaKnown RBP15.39■□□□□ 0.05
FDPS-219ENST00000495308 MOXD1Q6UVY6 613 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 HSCBQ8IWL3 235 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 TOX2Q96NM4 488 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 KATNAL1Q9BW62 490 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 FOXP1Q9H334 677 aaPredicted RBP15.39■□□□□ 0.05
FDPS-219ENST00000495308 TUT1Q9H6E5 874 aaKnown RBP15.39■□□□□ 0.05
FDPS-219ENST00000495308 TRMT13Q9NUP7 481 aaKnown RBP15.39■□□□□ 0.05
FDPS-219ENST00000495308 TANC1Q9C0D5 1861 aa15.39■□□□□ 0.05
FDPS-219ENST00000495308 TRIM43BA6NCK2 446 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 TLR3O15455 904 aaKnown RBP15.38■□□□□ 0.05
FDPS-219ENST00000495308 CD4P01730 458 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 LRCH2Q5VUJ6 765 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 NFRKBQ6P4R8 1299 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 SLC5A5Q92911 643 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 TRIM43Q96BQ3 446 aaPredicted RBP15.38■□□□□ 0.05
FDPS-219ENST00000495308 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 TMEM39AQ9NV64 488 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 HDAC6Q9UBN7 1215 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 SCN5AQ14524 2016 aa15.38■□□□□ 0.05
FDPS-219ENST00000495308 H3BQV1 296 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 CHMP2AO43633 222 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 GAS7O60861 476 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 GCFC2P16383 781 aaKnown RBP15.37■□□□□ 0.05
FDPS-219ENST00000495308 MARK3P27448 753 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 PRPF38BQ5VTL8 546 aaKnown RBP15.37■□□□□ 0.05
FDPS-219ENST00000495308 MCTP1Q6DN14 999 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 GDF6Q6KF10 455 aaPredicted RBP15.37■□□□□ 0.05
FDPS-219ENST00000495308 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 C7orf31Q8N865 590 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 GLG1Q92896 1179 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 PCYT2Q99447 389 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
FDPS-219ENST00000495308 SEZ6LQ9BYH1 1024 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 PRKAG2Q9UGJ0 569 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 GTF2IRD1Q9UHL9 959 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 TBX21Q9UL17 535 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 ZNF215Q9UL58 517 aaPredicted RBP15.37■□□□□ 0.05
FDPS-219ENST00000495308 EMSYQ7Z589 1322 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 MYH15Q9Y2K3 1946 aa15.37■□□□□ 0.05
FDPS-219ENST00000495308 PSMD10O75832 226 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 SUPT20HL2P0C7V6 817 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 CYP2C9P11712 490 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 ITGB8P26012 769 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 KRT76Q01546 638 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 PTPN11Q06124 597 aaPredicted RBP15.36■□□□□ 0.05
FDPS-219ENST00000495308 HIC1Q14526 733 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 LARP1BQ659C4 914 aaKnown RBP15.36■□□□□ 0.05
FDPS-219ENST00000495308 ZNF746Q6NUN9 644 aaPredicted RBP15.36■□□□□ 0.05
FDPS-219ENST00000495308 ABHD15Q6UXT9 468 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 CCDC60Q8IWA6 550 aaPredicted RBP15.36■□□□□ 0.05
FDPS-219ENST00000495308 TEKT3Q9BXF9 490 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 UNC45AQ9H3U1 944 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 KCNMB3Q9NPA1 279 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
FDPS-219ENST00000495308 BACH1O14867 736 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 LGR5O75473 907 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 ATG7O95352 703 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 SMIM10L2AP0DMW4 78 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 SMIM10L2BP0DMW5 78 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■□□□□ 10.9
FDPS-219ENST00000495308 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
FDPS-219ENST00000495308 MDM2Q00987 491 aaPredicted RBP15.35■□□□□ 0.05
FDPS-219ENST00000495308 SESTD1Q86VW0 696 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 INTS4Q96HW7 963 aaKnown RBP15.35■□□□□ 0.05
FDPS-219ENST00000495308 RIT2Q99578 217 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 RNPEPQ9H4A4 650 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 SMARCAD1Q9H4L7 1026 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 AZI2Q9H6S1 392 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 ERAP1Q9NZ08 941 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 NOD1Q9Y239 953 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 SAMM50Q9Y512 469 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 UMODL1Q5DID0 1318 aa15.35■□□□□ 0.05
FDPS-219ENST00000495308 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 IGKV6D-21A0A0A0MT36 114 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 VPS37CA5D8V6 355 aaPredicted RBP15.34■□□□□ 0.05
FDPS-219ENST00000495308 KIAA0355O15063 1070 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 MARCH6O60337 910 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 NEMFO60524 1076 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 RAG1P15918 1043 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 MCM7P33993 719 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 MAGEA10P43363 369 aaPredicted RBP15.34■□□□□ 0.05
FDPS-219ENST00000495308 NBR1Q14596 966 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 PTGISQ16647 500 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 MIS18BP1Q6P0N0 1132 aa15.34■□□□□ 0.05
FDPS-219ENST00000495308 SMAP1Q8IYB5 467 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms