RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, human

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX17-208	ENST00000493711	TTC12	Q9H892	705 aa	Predicted RBP	14.01	□□□□□ -0.17
SNX17-208	ENST00000493711	MLXIP	Q9HAP2	919 aa		14.01	□□□□□ -0.17
SNX17-208	ENST00000493711	JPH1	Q9HDC5	661 aa	Predicted RBP	14.01	□□□□□ -0.17
SNX17-208	ENST00000493711	PLXNB2	O15031	1838 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	GOLGA6L4	A6NEF3	574 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	DHX15	O43143	795 aa	Known RBP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	INHA	P05111	366 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	CAPN2	P17655	700 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	PPP2R5C	Q13362	524 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	CELF3	Q5SZQ8	465 aa	Known RBP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	SMAP1	Q8IYB5	467 aa	Predicted RBP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	KCTD17	Q8N5Z5	321 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	TMEM87A	Q8NBN3	555 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	ERMN	Q8TAM6	284 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	FTO	Q9C0B1	505 aa	Known RBP eCLIP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	AP5M1	Q9H0R1	490 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	SPC25	Q9HBM1	224 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	HMX1	Q9NP08	348 aa	Predicted RBP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	PDGFC	Q9NRA1	345 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	SLC9A2	Q9UBY0	812 aa		14	□□□□□ -0.17
SNX17-208	ENST00000493711	DDX49	Q9Y6V7	483 aa	Known RBP	14	□□□□□ -0.17
SNX17-208	ENST00000493711	WDR64	B1ANS9	1081 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	ATP9A	O75110	1047 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	DUSP11	O75319	330 aa	Known RBP	13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	GGPS1	O95749	300 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	PTMS	P20962	102 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	MARCKS	P29966	332 aa	Predicted RBP	13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	CNGA1	P29973	690 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	TXLNA	P40222	546 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	ADCYAP1R1	P41586	468 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	ITGB3BP	Q13352	177 aa	Predicted RBP	13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	LY6K	Q17RY6	165 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	PRAMEF19	Q5SWL8	479 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	HAUS3	Q68CZ6	603 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	ADAL	Q6DHV7	355 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	IGSF22	Q8N9C0	903 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	NEK9	Q8TD19	979 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	LRWD1	Q9UFC0	647 aa		13.99	□□□□□ -0.17
SNX17-208	ENST00000493711	FBXO2	Q9UK22	296 aa	Predicted RBP	13.99	□□□□□ -0.17
SNX17-208	ENST00000493711		A0A1W2PQ27	194 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711		A0A1W2PQ64	194 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711		A0A1W2PQD8	194 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	VWA3A	A6NCI4	1184 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	NOP56	O00567	594 aa	Known RBP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	DKC1	O60832	514 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	FARP2	O94887	1054 aa	Predicted RBP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	PSAP	P07602	524 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	RARB	P10826	455 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	SMPD1	P17405	629 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	MUT	P22033	750 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	TEC	P42680	631 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	SP2	Q02086	613 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	EPHA7	Q15375	998 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	LCE2D	Q5TA82	110 aa	Predicted RBP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	KRT79	Q5XKE5	535 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	MIS18BP1	Q6P0N0	1132 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	B3GNT9	Q6UX72	402 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	CYFIP1	Q7L576	1253 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	MIER3	Q7Z3K6	550 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	PPTC7	Q8NI37	304 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	SEPT1	Q8WYJ6	367 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	SPATA33	Q96N06	139 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	PYM1	Q9BRP8	204 aa	Known RBP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	PKD2L1	Q9P0L9	805 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	VAV3	Q9UKW4	847 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	GNE	Q9Y223	722 aa	Known RBP	13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	PCDHA10	Q9Y5I2	948 aa		13.98	□□□□□ -0.17
SNX17-208	ENST00000493711	SMCHD1	A6NHR9	2005 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	ZEB2	O60315	1214 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	KPNA6	O60684	536 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	PPFIA4	O75335	1185 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	ARIH2	O95376	493 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	UBA7	P41226	1012 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	CPT1A	P50416	773 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	NKX3-2	P78367	333 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	ARHGAP1	Q07960	439 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	SPIRE1	Q08AE8	756 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	TRPV1	Q8NER1	839 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	OR6J1	Q8NGC5	347 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	UNC45A	Q9H3U1	944 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	DISC1	Q9NRI5	854 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	FAM13B	Q9NYF5	915 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	DDX20	Q9UHI6	824 aa	Known RBP	13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	PCDHA7	Q9UN72	937 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	SAMM50	Q9Y512	469 aa		13.97	□□□□□ -0.17
SNX17-208	ENST00000493711	STK25	O00506	426 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	DYNC1LI2	O43237	492 aa	Predicted RBP	13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	ATG7	O95352	703 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	CMA1	P23946	247 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	GJA9	P57773	515 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	ACTR2	P61160	394 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	TRIM32	Q13049	653 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	FAM160B1	Q5W0V3	765 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	NCAPH2	Q6IBW4	605 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	TLK2	Q86UE8	772 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	ARMC5	Q96C12	935 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	CSRNP2	Q9H175	543 aa		13.96	□□□□□ -0.17
SNX17-208	ENST00000493711	UPF3A	Q9H1J1	476 aa	Known RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms