RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-206ENST00000489142 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-206ENST00000489142 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-206ENST00000489142 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 ZNF215Q9UL58 517 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-206ENST00000489142 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 PRUNE2Q8WUY3 3088 aa16.02■□□□□ 0.15
VTI1A-206ENST00000489142 SIP14410 1827 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
VTI1A-206ENST00000489142 CTSHP09668 335 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 HOXC8P31273 242 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 ARHGAP4P98171 946 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 RBL2Q08999 1139 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
VTI1A-206ENST00000489142 JPH1Q9HDC5 661 aaPredicted RBP16.01■□□□□ 0.15
VTI1A-206ENST00000489142 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
VTI1A-206ENST00000489142 DTNBO60941 627 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 FOSP01100 380 aaPredicted RBP16■□□□□ 0.15
VTI1A-206ENST00000489142 ZNF76P36508 570 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 SREBF1P36956 1147 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 DEFB103AP81534 67 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
VTI1A-206ENST00000489142 ITGB3BPQ13352 177 aaPredicted RBP16■□□□□ 0.15
VTI1A-206ENST00000489142 AP3B2Q13367 1082 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 CEP55Q53EZ4 464 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 PPP2R2DQ66LE6 453 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 GLG1Q92896 1179 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 SLC28A3Q9HAS3 691 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
VTI1A-206ENST00000489142 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 SLC9A2Q9UBY0 812 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 MICAL3Q7RTP6 2002 aa16■□□□□ 0.15
VTI1A-206ENST00000489142 RSPH10B2B2RC85 870 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 FAM86B1E9PN63 330 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 CXCL10P02778 98 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 CA3P07451 260 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 FAM86B2P0C5J1 330 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 RSPH10BP0C881 870 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 WDR5P61964 334 aaKnown RBP15.99■□□□□ 0.15
VTI1A-206ENST00000489142 CNKSR3Q6P9H4 555 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 REXO1Q8N1G1 1221 aaKnown RBP15.99■□□□□ 0.15
VTI1A-206ENST00000489142 ZBTB10Q96DT7 871 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 SLC9A7Q96T83 725 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 PCYT2Q99447 389 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 ZMYND12Q9H0C1 365 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 C6orf50Q9HD87 102 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 PDRG1Q9NUG6 133 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 PCDHA11Q9Y5I1 949 aa15.99■□□□□ 0.15
VTI1A-206ENST00000489142 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
VTI1A-206ENST00000489142 BAIAP3O94812 1187 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
VTI1A-206ENST00000489142 IFNAR1P17181 557 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 KCNJ6P48051 423 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 EVCP57679 992 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 ACTR2P61160 394 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 IGBP1P78318 339 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 PPFIA1Q13136 1202 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 ERICH6BQ5W0A0 696 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 HERC6Q8IVU3 1022 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 USP38Q8NB14 1042 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 PPM1EQ8WY54 764 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 SDF4Q9BRK5 362 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
VTI1A-206ENST00000489142 GLT8D2Q9H1C3 349 aa15.98■□□□□ 0.15
VTI1A-206ENST00000489142 ESYT2A0FGR8 921 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 MEIS1O00470 390 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 MAFGO15525 162 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 ADGRE1Q14246 886 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 GRIK4Q16099 956 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 FAM117BQ6P1L5 589 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 SPRED2Q7Z698 418 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 PLA2G4DQ86XP0 818 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 CCDC12Q8WUD4 166 aaPredicted RBP15.97■□□□□ 0.15
VTI1A-206ENST00000489142 AIFM3Q96NN9 605 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 TM6SF1Q9BZW5 370 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 SMARCAD1Q9H4L7 1026 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 ERAP1Q9NZ08 941 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
VTI1A-206ENST00000489142 NFASCO94856 1347 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 A0A0C4DFX4 3053 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 COL4A4P53420 1690 aaPredicted RBP15.96■□□□□ 0.15
VTI1A-206ENST00000489142 IGLV3-22A0A075B6J6 115 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 LCHNA4D1U4 455 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 RFXAPO00287 272 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 LGR5O75473 907 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 PARNO95453 639 aaKnown RBP15.96■□□□□ 0.15
VTI1A-206ENST00000489142 CCNE2O96020 404 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 GNAT1P11488 350 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 IGFBP4P22692 258 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 ADAM17P78536 824 aa15.96■□□□□ 0.15
VTI1A-206ENST00000489142 SSRP1Q08945 709 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms