RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PLIN1O60240 522 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 IL2RAP01589 272 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 MMP1P03956 469 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ITGB8P26012 769 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 NBL1P41271 181 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 CDK8P49336 464 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 PDE4BQ07343 736 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ITGA7Q13683 1181 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 LAMC2Q13753 1193 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 KCNA10Q16322 511 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 CCL14Q16627 93 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 TAPT1Q6NXT6 567 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ARMCX2Q7L311 632 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM178BQ8IXR5 827 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ZDHHC14Q8IZN3 488 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 LRRC47Q8N1G4 583 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 TGFBRAP1Q8WUH2 860 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 FTHL17Q9BXU8 183 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 NACAP1Q9BZK3 213 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 HIPK3Q9H422 1215 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 NSUN3Q9H649 340 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ELAC1Q9H777 363 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 DZANK1Q9NVP4 752 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 DDX19BQ9UMR2 479 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 INSL6Q9Y581 213 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 PNMA6FA0A0J9YX94 578 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 H3BNC9 293 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 hCG_1984214I3L0E3 225 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 FSCN2O14926 492 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 TREHO43280 583 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 POLR3DP05423 398 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ATP2A2P16615 1042 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 IRS1P35568 1242 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 RCAN1P53805 252 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 PURAQ00577 322 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 RELBQ01201 579 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 TNFAIP2Q03169 654 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 GRIN2CQ14957 1233 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 TLR1Q15399 786 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 SMAD2Q15796 467 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 C8orf34Q49A92 452 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF394Q53GI3 561 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ASPRV1Q53RT3 343 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 C9orf50Q5SZB4 431 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CEP85Q6P2H3 762 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 SLC4A10Q6U841 1118 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 C16orf59Q7L2K0 433 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CLASRPQ8N2M8 674 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF713Q8N859 430 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 KDF1Q8NAX2 398 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 PPTC7Q8NI37 304 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 GPR152Q8TDT2 470 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MTMR8Q96EF0 704 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MSANTD3Q96H12 275 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 GLT8D2Q9H1C3 349 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 SLC28A3Q9HAS3 691 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 RC3H2Q9HBD1 1191 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 HELLSQ9NRZ9 838 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 C1orf112Q9NSG2 853 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MTMR4Q9NYA4 1195 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 SCHIP1Q9P0W5 487 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 VTI1BQ9UEU0 232 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 DBNLQ9UJU6 430 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 NOB1Q9ULX3 412 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 IQSEC3Q9UPP2 1182 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 DOCK3Q8IZD9 2030 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ATG2AQ2TAZ0 1938 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 PLXNA3P51805 1871 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 A6NJY4 79 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 HIP1O00291 1037 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MAFGO15525 162 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 NDUFB5O43674 189 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 FLOT1O75955 427 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 F2P00734 622 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 GH1P01241 217 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ASGR1P07306 291 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 IQCF3P0C7M6 154 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 BMP3P12645 472 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 HOXB8P17481 243 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 IGFBP4P22692 258 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 SLC26A2P50443 739 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 STAT2P52630 851 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MLLT6P55198 1093 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 MCCD1P59942 119 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 JAG1P78504 1218 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CDC42EP1Q00587 391 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 TAP1Q03518 808 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 FOXC1Q12948 553 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 DDX10Q13206 875 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 PICALMQ13492 652 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZNF528Q3MIS6 628 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 FAM47AQ5JRC9 791 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CCDC62Q6P9F0 684 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 NIPA1Q7RTP0 329 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 TLK2Q86UE8 772 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 NME8Q8N427 588 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 KBTBD3Q8NAB2 608 aa3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 CMASQ8NFW8 434 aaPredicted RBP3.2□□□□□ -1.9
DEPDC1-203ENST00000488146 ZDHHC1Q8WTX9 485 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms