RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 AP5M1Q9H0R1 490 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 EPHX3Q9H6B9 360 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 AZI2Q9H6S1 392 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 GDPD2Q9HCC8 539 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 PKD2L1Q9P0L9 805 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 SRPRBQ9Y5M8 271 aaKnown RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 KDM3AQ9Y4C1 1321 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 WDR64B1ANS9 1081 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 FAM86B1E9PN63 330 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 DDX39AO00148 427 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 BACH1O14867 736 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 ADAMTS3O15072 1205 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MSH4O15457 936 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 CHMP2AO43633 222 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 SLC37A4O43826 429 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 ZEB2O60315 1214 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MSCO60682 206 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 GH1P01241 217 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 HMGCRP04035 888 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 PSAPP07602 524 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 FAM86B2P0C5J1 330 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 CCL5P13501 91 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 AKR1A1P14550 325 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 ITGB5P18084 799 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MCM4P33991 863 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 JAK3P52333 1124 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MRPS9P82933 396 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 SP4Q02446 784 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 NHLH1Q02575 133 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 TNFAIP2Q03169 654 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MIS18BP1Q6P0N0 1132 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 FBXO16Q8IX29 292 aaPredicted RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 SMAP1Q8IYB5 467 aaPredicted RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 CEP57L1Q8IYX8 460 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 ZNF579Q8NAF0 562 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 IL31RAQ8NI17 732 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 NPLOC4Q8TAT6 608 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 PXYLP1Q8TE99 480 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 U2AF1L4Q8WU68 220 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 UBE2Q2Q8WVN8 375 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MRPS27Q92552 414 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 ZFP91Q96JP5 570 aaPredicted RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 SPATA33Q96N06 139 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 ANP32EQ9BTT0 268 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 FTOQ9C0B1 505 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBR4-214ENST00000486515 ARHGAP39Q9C0H5 1083 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 LRRC27Q9C0I9 530 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 AGO4Q9HCK5 861 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 JPH1Q9HDC5 661 aaPredicted RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 SLC9A2Q9UBY0 812 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 DDX49Q9Y6V7 483 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 MORC2Q9Y6X9 1032 aaPredicted RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 RLFQ13129 1914 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 MYH15Q9Y2K3 1946 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 BAZ2BQ9UIF8 2168 aaKnown RBP7.81□□□□□ -1.16
UBR4-214ENST00000486515 ZDBF2Q9HCK1 2354 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 UNC79Q9P2D8 2635 aa7.81□□□□□ -1.16
UBR4-214ENST00000486515 A0A1W2PQ27 194 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 A0A1W2PQ64 194 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 A0A1W2PQD8 194 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 SPATA31C2B4DYI2 1134 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 SLC26A4O43511 780 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 KINO60870 393 aaKnown RBP7.8□□□□□ -1.16
UBR4-214ENST00000486515 GGPS1O95749 300 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 ARP10275 920 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 RARBP10826 455 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CMA1P23946 247 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 GRK4P32298 578 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 ICAM3P32942 547 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CYP2C19P33261 490 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CCT6AP40227 531 aaKnown RBP7.8□□□□□ -1.16
UBR4-214ENST00000486515 CPT1AP50416 773 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.166e-10■■■□□ 15.2
UBR4-214ENST00000486515 AMPD3Q01432 767 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 PTPAQ15257 358 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 FAM160B1Q5W0V3 765 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 ZNF746Q6NUN9 644 aaPredicted RBP7.8□□□□□ -1.16
UBR4-214ENST00000486515 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CYFIP1Q7L576 1253 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CABP7Q86V35 215 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CKAP2LQ8IYA6 745 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 FSIP1Q8NA03 581 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 IQUBQ8NA54 791 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 RDM1Q8NG50 284 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 SNX29Q8TEQ0 813 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CRYGNQ8WXF5 182 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 SEPT1Q8WYJ6 367 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 SLC5A5Q92911 643 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 ATP6V0A1Q93050 837 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 CCDC47Q96A33 483 aaKnown RBP7.8□□□□□ -1.16
UBR4-214ENST00000486515 MBOAT7Q96N66 472 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 NECAB3Q96P71 396 aaPredicted RBP7.8□□□□□ -1.16
UBR4-214ENST00000486515 CSRNP2Q9H175 543 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 TMEM60Q9H2L4 133 aa7.8□□□□□ -1.16
UBR4-214ENST00000486515 HMX1Q9NP08 348 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms