RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 ZNF746Q6NUN9 644 aaPredicted RBP12.85□□□□□ -0.35
NUP50-216ENST00000486184 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
NUP50-216ENST00000486184 SEPT1Q8WYJ6 367 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 IPO9Q96P70 1041 aaKnown RBP12.85□□□□□ -0.35
NUP50-216ENST00000486184 AZI2Q9H6S1 392 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 KCNMB3Q9NPA1 279 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
NUP50-216ENST00000486184 TCHHQ07283 1943 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 WNT7AO00755 349 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 BACH1O14867 736 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 PPFIA4O75335 1185 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 CABYRO75952 493 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 BRD1O95696 1058 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 PSAPP07602 524 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 ACLYP53396 1101 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 ACTR2P61160 394 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 NKX3-2P78367 333 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 PTGDRQ13258 359 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 KLHDC9Q8NEP7 349 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 GJA10Q969M2 543 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 GPR20Q99678 358 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 MTG1Q9BT17 334 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 RAB34Q9BZG1 259 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 TTC12Q9H892 705 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
NUP50-216ENST00000486184 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
NUP50-216ENST00000486184 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 CTAGE5O15320 804 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 PSMD10O75832 226 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 ZNF286BP0CG31 522 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 FAM173BQ6P4H8 233 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 RDM1Q8NG50 284 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 HAS1Q92839 578 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 GLG1Q92896 1179 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 FERMT2Q96AC1 680 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 UNC45AQ9H3U1 944 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 STARD7Q9NQZ5 370 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 CFAP45Q9UL16 551 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
NUP50-216ENST00000486184 PHF24Q9UPV7 400 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 PCDHA10Q9Y5I2 948 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 LOXHD1Q8IVV2 1947 aa12.83□□□□□ -0.36
NUP50-216ENST00000486184 SCN10AQ9Y5Y9 1956 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 CCNE2O96020 404 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 LGALS2P05162 132 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 SUPT20HL2P0C7V6 817 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 PRPHP41219 470 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 TECP42680 631 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
NUP50-216ENST00000486184 PURAQ00577 322 aaKnown RBP12.82□□□□□ -0.36
NUP50-216ENST00000486184 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 STK38Q15208 465 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 DTHD1Q6ZMT9 781 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 DIS3LQ8TF46 1054 aaKnown RBP12.82□□□□□ -0.36
NUP50-216ENST00000486184 PAWRQ96IZ0 340 aaKnown RBP12.82□□□□□ -0.36
NUP50-216ENST00000486184 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 DISC1Q9NRI5 854 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
NUP50-216ENST00000486184 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
NUP50-216ENST00000486184 GSTTP1A0A1W2PQM5 241 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 H3BRB1 525 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 HOXD8P13378 290 aaPredicted RBP12.81□□□□□ -0.36
NUP50-216ENST00000486184 STAT5BP51692 787 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
NUP50-216ENST00000486184 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
NUP50-216ENST00000486184 CKAP2LQ8IYA6 745 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
NUP50-216ENST00000486184 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 USP28Q96RU2 1077 aa12.81□□□□□ -0.36
NUP50-216ENST00000486184 TUT1Q9H6E5 874 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms