RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 XBP1P17861 261 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 SETQ01105 290 aaPredicted RBP12.78□□□□□ -0.36
SORT1-204ENST00000482236 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 IKBKEQ14164 716 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 CEP55Q53EZ4 464 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 PLA2G4DQ86XP0 818 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 CKAP2LQ8IYA6 745 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 KCNB2Q92953 911 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
SORT1-204ENST00000482236 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
SORT1-204ENST00000482236 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
SORT1-204ENST00000482236 SMARCAD1Q9H4L7 1026 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 KCNH7Q9NS40 1196 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 SAMM50Q9Y512 469 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
SORT1-204ENST00000482236 HAS3O00219 553 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 TREHO43280 583 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 EFCAB14O75071 495 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 HOXD8P13378 290 aaPredicted RBP12.77□□□□□ -0.37
SORT1-204ENST00000482236 KCNA2P16389 499 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
SORT1-204ENST00000482236 SREBF1P36956 1147 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 FAM160B1Q5W0V3 765 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 FAM117BQ6P1L5 589 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
SORT1-204ENST00000482236 UIMC1Q96RL1 719 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 ZNF577Q9BSK1 485 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.37
SORT1-204ENST00000482236 BCAS3Q9H6U6 928 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 NRCAMQ92823 1304 aa12.77□□□□□ -0.37
SORT1-204ENST00000482236 ESYT2A0FGR8 921 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 ATP9AO75110 1047 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 DEXIO95424 95 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 AMHP03971 560 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 FUT2Q10981 343 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
SORT1-204ENST00000482236 GRIK4Q16099 956 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 MIS18BP1Q6P0N0 1132 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 LMBR1Q8WVP7 490 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 SEPT8Q92599 483 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
SORT1-204ENST00000482236 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
SORT1-204ENST00000482236 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
SORT1-204ENST00000482236 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
SORT1-204ENST00000482236 MARCH6O60337 910 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 CAND2O75155 1236 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 LGR5O75473 907 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 CA3P07451 260 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 MYOGP15173 224 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 IFNAR1P17181 557 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
SORT1-204ENST00000482236 ACTR2P61160 394 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 PRR16Q569H4 304 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 TAF2Q6P1X5 1199 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
SORT1-204ENST00000482236 HERC6Q8IVU3 1022 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 MYOCDQ8IZQ8 938 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 ZMYND12Q9H0C1 365 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 CERS4Q9HA82 394 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
SORT1-204ENST00000482236 YBX2Q9Y2T7 364 aaKnown RBP12.75□□□□□ -0.37
SORT1-204ENST00000482236 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
SORT1-204ENST00000482236 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 NID2Q14112 1375 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 NFASCO94856 1347 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
SORT1-204ENST00000482236 CHMP2AO43633 222 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 NBNO60934 754 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 ARP10275 920 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 STAT5BP51692 787 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 WDR5P61964 334 aaKnown RBP12.74□□□□□ -0.37
SORT1-204ENST00000482236 TOB2Q14106 344 aaPredicted RBP12.74□□□□□ -0.37
SORT1-204ENST00000482236 PDXDC2PQ6P474 469 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
SORT1-204ENST00000482236 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 ZNF274Q96GC6 653 aaPredicted RBP12.74□□□□□ -0.37
SORT1-204ENST00000482236 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
SORT1-204ENST00000482236 BRMS1Q9HCU9 246 aa12.74□□□□□ -0.37
SORT1-204ENST00000482236 CCDC194A0A1B0GVG4 234 aa12.73□□□□□ -0.37
SORT1-204ENST00000482236 GSTTP1A0A1W2PQM5 241 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms