RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 USP11P51784 963 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 MRPS9P82933 396 aaKnown RBP15□□□□□ -0.01
BRAT1-205ENST00000473879 PURAQ00577 322 aaKnown RBP15□□□□□ -0.01
BRAT1-205ENST00000473879 ITGA7Q13683 1181 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 PTPAQ15257 358 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 LY6KQ17RY6 165 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 LETM2Q2VYF4 491 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 PGBD1Q96JS3 809 aa15□□□□□ -0.01
BRAT1-205ENST00000473879 INPP4AQ96PE3 977 aaPredicted RBP15□□□□□ -0.01
BRAT1-205ENST00000473879 DDX41Q9UJV9 622 aaKnown RBP15□□□□□ -0.01
BRAT1-205ENST00000473879 GRIN2DO15399 1336 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 TLR3O15455 904 aaKnown RBP14.99□□□□□ -0.01
BRAT1-205ENST00000473879 CCNT1O60563 726 aaKnown RBP14.99□□□□□ -0.01
BRAT1-205ENST00000473879 STAM2O75886 525 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 ARHGAP1Q07960 439 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 ZNF174Q15697 407 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 PCNX4Q63HM2 1172 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 MOXD1Q6UVY6 613 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 FAM126BQ8IXS8 530 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 EMID1Q96A84 441 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-205ENST00000473879 MTG1Q9BT17 334 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-205ENST00000473879 TMEM39AQ9NV64 488 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 MRVI1Q9Y6F6 885 aa14.99□□□□□ -0.01
BRAT1-205ENST00000473879 EDIL3O43854 480 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 NEMFO60524 1076 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 CUTAO60888 179 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 CD4P01730 458 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 MYL3P08590 195 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 TGFB3P10600 412 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 ICAM3P32942 547 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 ARHGAP4P98171 946 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 ATP2C1P98194 919 aaPredicted RBP14.98□□□□□ -0.01
BRAT1-205ENST00000473879 PPP4R3AQ6IN85 833 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 TDHQ8IZJ6 230 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 KRI1Q8N9T8 703 aaKnown RBP14.98□□□□□ -0.01
BRAT1-205ENST00000473879 BADQ92934 168 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 TBX21Q9UL17 535 aa14.98□□□□□ -0.01
BRAT1-205ENST00000473879 SCN10AQ9Y5Y9 1956 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 WNT7AO00755 349 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 CYP3A4P08684 503 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 HOXD8P13378 290 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-205ENST00000473879 RAG1P15918 1043 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 ITGB8P26012 769 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 MARCKSP29966 332 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-205ENST00000473879 PSMC6P62333 389 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 PTGDRQ13258 359 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 ARL6IP4Q66PJ3 421 aaKnown RBP14.97□□□□□ -0.01
BRAT1-205ENST00000473879 ADALQ6DHV7 355 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 AFG1LQ8WV93 481 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 PCDHA7Q9UN72 937 aa14.97□□□□□ -0.01
BRAT1-205ENST00000473879 CYP3A7-CYP3A51PA0A087WV96 503 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 A0A1W2PQD8 194 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 GADD45BO75293 160 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-205ENST00000473879 TIMP1P01033 207 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 MMP3P08254 477 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 CYP3A7P24462 503 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 ZNF76P36508 570 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 PRPHP41219 470 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 KLHL40Q2TBA0 621 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 GNPTABQ3T906 1256 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 DHX37Q8IY37 1157 aaKnown RBP14.96□□□□□ -0.01
BRAT1-205ENST00000473879 DDX25Q9UHL0 483 aaKnown RBP14.96□□□□□ -0.01
BRAT1-205ENST00000473879 FBXO2Q9UK22 296 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-205ENST00000473879 SRPRBQ9Y5M8 271 aaKnown RBP14.96□□□□□ -0.01
BRAT1-205ENST00000473879 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.01
BRAT1-205ENST00000473879 TRAK2O60296 914 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 TDP2O95551 362 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 OR52Z1P0C646 297 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 ITGB5P18084 799 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 CIITAP33076 1130 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 CALCRLQ16602 461 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 DGKDQ16760 1214 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 LRIT3Q3SXY7 679 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 CELF3Q5SZQ8 465 aaKnown RBP14.95□□□□□ -0.02
BRAT1-205ENST00000473879 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
BRAT1-205ENST00000473879 PPTC7Q8NI37 304 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 MRPS27Q92552 414 aaKnown RBP14.95□□□□□ -0.02
BRAT1-205ENST00000473879 ZFP91Q96JP5 570 aaPredicted RBP14.95□□□□□ -0.02
BRAT1-205ENST00000473879 MBOAT7Q96N66 472 aa14.95□□□□□ -0.02
BRAT1-205ENST00000473879 IGLV3-22A0A075B6J6 115 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 SPATA31C2B4DYI2 1134 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 B4GALT4O60513 344 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
BRAT1-205ENST00000473879 SETQ01105 290 aaPredicted RBP14.94□□□□□ -0.02
BRAT1-205ENST00000473879 SP2Q02086 613 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 PTPN11Q06124 597 aaPredicted RBP14.94□□□□□ -0.02
BRAT1-205ENST00000473879 NBPF20Q3BBV1 942 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 Q4G0T1 1027 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 MFSD5Q6N075 450 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 DTHD1Q6ZMT9 781 aa14.94□□□□□ -0.02
BRAT1-205ENST00000473879 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms