RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 H3BRB1 525 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 MSH4O15457 936 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 CHMP2AO43633 222 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 ATP9AO75110 1047 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 LGALS2P05162 132 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 OR52Z1P0C646 297 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 SUPT20HL2P0C7V6 817 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 GNAT1P11488 350 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 ACTR2P61160 394 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 NUCB2P80303 420 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 PURAQ00577 322 aaKnown RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 SP2Q02086 613 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 HSDL1Q3SXM5 330 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 UTP14CQ5TAP6 766 aaKnown RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 NFRKBQ6P4R8 1299 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 CXCL17Q6UXB2 119 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 FERMT3Q86UX7 667 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 POTEDQ86YR6 584 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 NEK9Q8TD19 979 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 DPF3Q92784 378 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 SLC5A5Q92911 643 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 ATP6V0A1Q93050 837 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 FAM167AQ96KS9 214 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 CCDC43Q96MW1 224 aaKnown RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 MBOAT7Q96N66 472 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF396Q96N95 335 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 GPR20Q99678 358 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 TTC12Q9H892 705 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-206ENST00000462613 DISC1Q9NRI5 854 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 NR2E3Q9Y5X4 410 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 EMSYQ7Z589 1322 aa7.19□□□□□ -1.26
SF3B1-206ENST00000462613 MYADML2A6NDP7 307 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 FAM205CA6NFA0 338 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 KIF28PB7ZC32 967 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ARVCFO00192 962 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ADAMTS3O15072 1205 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 SLC37A4O43826 429 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 EVI5O60447 810 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 PSMD10O75832 226 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 F2P00734 622 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 RPLP2P05387 115 aaKnown RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF286BP0CG31 522 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ZSCAN22P10073 491 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 TXKP42681 527 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 PSEN2P49810 448 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 STAT5BP51692 787 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ATN1P54259 1190 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 MLLT1Q03111 559 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ITGB3BPQ13352 177 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 PPP2R5CQ13362 524 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 MFSD10Q14728 455 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF174Q15697 407 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 KIAA0753Q2KHM9 967 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 EARS2Q5JPH6 523 aaKnown RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 C1orf53Q5VUE5 145 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 HAUS3Q68CZ6 603 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 NCAPH2Q6IBW4 605 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 CCSAPQ6IQ19 270 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 SLC39A5Q6ZMH5 540 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 DTHD1Q6ZMT9 781 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 CCDC155Q8N6L0 562 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ETNPPLQ8TBG4 499 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 DIS3LQ8TF46 1054 aaKnown RBP7.18□□□□□ -1.26
SF3B1-206ENST00000462613 LENG9Q96B70 501 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 KCNMB3Q9NPA1 279 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF302Q9NR11 478 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 CFAP45Q9UL16 551 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 TRPC6Q9Y210 931 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 MTMR6Q9Y217 621 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
SF3B1-206ENST00000462613 PDE4DIPQ5VU43 2346 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 GSTTP1A0A1W2PQM5 241 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 HBP1O60381 514 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 PQBP1O60828 265 aaKnown RBP7.17□□□□□ -1.26
SF3B1-206ENST00000462613 F13A1P00488 732 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 COL6A1P12109 1028 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 HOXD8P13378 290 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-206ENST00000462613 TXLNAP40222 546 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 PRPHP41219 470 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 RTP1P59025 263 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 PTGDRQ13258 359 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 SF3A1Q15459 793 aaKnown RBP7.17□□□□□ -1.26
SF3B1-206ENST00000462613 NBPF20Q3BBV1 942 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 TMEM63BQ5T3F8 832 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 ARL6IP4Q66PJ3 421 aaKnown RBP7.17□□□□□ -1.26
SF3B1-206ENST00000462613 ATL3Q6DD88 541 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 SWSAP1Q6NVH7 229 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 PLPPR4Q7Z2D5 763 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 EXOC8Q8IYI6 725 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 RASSF8Q8NHQ8 419 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 AFAP1L1Q8TED9 768 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 TOX2Q96NM4 488 aa7.17□□□□□ -1.26
SF3B1-206ENST00000462613 UIMC1Q96RL1 719 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms