RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 NCOA5Q9HCD5 579 aaKnown RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 MSRAQ9UJ68 235 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 EMSYQ7Z589 1322 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 MAFGO15525 162 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 PARNO95453 639 aaKnown RBP11.61□□□□□ -0.55
SF3A3-204ENST00000462258 FOSL2P15408 326 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 ATP2A2P16615 1042 aaKnown RBP11.61□□□□□ -0.55
SF3A3-204ENST00000462258 CEP55Q53EZ4 464 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 REXO1Q8N1G1 1221 aaKnown RBP11.61□□□□□ -0.55
SF3A3-204ENST00000462258 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 SDF4Q9BRK5 362 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF576Q9H609 170 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 C6orf50Q9HD87 102 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 KCNH7Q9NS40 1196 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
SF3A3-204ENST00000462258 UNC80Q8N2C7 3258 aa11.61□□□□□ -0.55
SF3A3-204ENST00000462258 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 TREHO43280 583 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 NBNO60934 754 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 CXCL10P02778 98 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 MARK3P27448 753 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 GNA11P29992 359 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF76P36508 570 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 THPOP40225 353 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 RABGGTBP53611 331 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 ITGB3BPQ13352 177 aaPredicted RBP11.6□□□□□ -0.55
SF3A3-204ENST00000462258 GPNMBQ14956 572 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF618Q5T7W0 954 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 CNKSR3Q6P9H4 555 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 NKX2-4Q9H2Z4 354 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 RNPEPQ9H4A4 650 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 AGO4Q9HCK5 861 aaKnown RBP11.6□□□□□ -0.55
SF3A3-204ENST00000462258 PDRG1Q9NUG6 133 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 VPS54Q9P1Q0 977 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 NFASCO94856 1347 aa11.6□□□□□ -0.55
SF3A3-204ENST00000462258 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 FAM86B1E9PN63 330 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 CPLX1O14810 134 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 ADAMTS3O15072 1205 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 CAND2O75155 1236 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 CTSHP09668 335 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 FAM86B2P0C5J1 330 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 ARP10275 920 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 GNAT1P11488 350 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 KCNJ6P48051 423 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 ANAPC15P60006 121 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 SETQ01105 290 aaPredicted RBP11.59□□□□□ -0.55
SF3A3-204ENST00000462258 PPFIA1Q13136 1202 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 STK3Q13188 491 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 GRIN2CQ14957 1233 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 PPP2R2DQ66LE6 453 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 MCTP2Q6DN12 878 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 BICD2Q8TD16 824 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 GLG1Q92896 1179 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF274Q96GC6 653 aaPredicted RBP11.59□□□□□ -0.55
SF3A3-204ENST00000462258 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
SF3A3-204ENST00000462258 SLC28A3Q9HAS3 691 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 PCDHA11Q9Y5I1 949 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 NRCAMQ92823 1304 aa11.59□□□□□ -0.55
SF3A3-204ENST00000462258 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 IGLV3-22A0A075B6J6 115 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 DDX39AO00148 427 aaKnown RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 MEIS1O00470 390 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 LGR5O75473 907 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 DEXIO95424 95 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 CYP3A4P08684 503 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 ACTR2P61160 394 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 SSRP1Q08945 709 aaKnown RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 HERC6Q8IVU3 1022 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 MAFAQ8NHW3 353 aaPredicted RBP11.58□□□□□ -0.56
SF3A3-204ENST00000462258 PHOSPHO2Q8TCD6 241 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 CRYGNQ8WXF5 182 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 SMARCAD1Q9H4L7 1026 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 AZI2Q9H6S1 392 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 SH3GLB2Q9NR46 395 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
SF3A3-204ENST00000462258 LOXHD1Q8IVV2 1947 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 CA3P07451 260 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms