RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DHX16O60231 1041 aaKnown RBP19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 PDE1AP54750 535 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 SEMA3FQ13275 785 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 ADGRD2Q7Z7M1 963 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 LMBR1Q8WVP7 490 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 PBXIP1Q96AQ6 731 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 EHMT1Q9H9B1 1298 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 RWDD3Q9Y3V2 267 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 SPTBN4Q9H254 2564 aa19.99■□□□□ 0.79
UBE2D4-209ENST00000454428 ZXDAP98168 799 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 MGAT3Q09327 533 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 CBX2Q14781 532 aaPredicted RBP19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 SLC35G1Q2M3R5 365 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 SMRP1Q8NCR6 262 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 GPR20Q99678 358 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 USP26Q9BXU7 913 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 PLAGL2Q9UPG8 496 aa19.98■□□□□ 0.79
UBE2D4-209ENST00000454428 B4E1Z4 1266 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 ENPP3O14638 875 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 GHRP10912 638 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 CCND2P30279 289 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 MRPS9P82933 396 aaKnown RBP19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 LPIN1Q14693 890 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 RUFY4Q6ZNE9 571 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 IQCA1Q86XH1 822 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 CRIPAKQ8N1N5 446 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 ZSWIM5Q9P217 1185 aa19.97■□□□□ 0.79
UBE2D4-209ENST00000454428 DGKIO75912 1065 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 GLP2RO95838 553 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 ICAM3P32942 547 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 NDUFV1P49821 464 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 RRP1P56182 461 aaKnown RBP19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 ARHGAP4P98171 946 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 COASYQ13057 564 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 CCDC178Q5BJE1 867 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 METTL7BQ6UX53 244 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 TICAM2Q86XR7 235 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 LINC01599Q8WXQ3 324 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 PLVAPQ9BX97 442 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 FAM86C1Q9NVL1 165 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 PCDHA1Q9Y5I3 950 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 MRPL42Q9Y6G3 142 aaKnown RBP19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 KAT6AQ92794 2004 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 PLXNA3P51805 1871 aa19.96■□□□□ 0.79
UBE2D4-209ENST00000454428 PLXNA4Q9HCM2 1894 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 NOP56O00567 594 aaKnown RBP19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 ZNF213O14771 459 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 ZBTB5O15062 677 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 ITGB1P05556 798 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 GNAT1P11488 350 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 VCPP55072 806 aaKnown RBP19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 BTG3Q14201 252 aaPredicted RBP19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 CYFIP1Q7L576 1253 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 FBXL6Q8N531 539 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 SAMD3Q8N6K7 520 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 EFHBQ8N7U6 833 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 SPPL3Q8TCT6 385 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 P2RX5Q93086 422 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 ASIC4Q96FT7 647 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 INPP4AQ96PE3 977 aaPredicted RBP19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 MAD2L2Q9UI95 211 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 BAZ2BQ9UIF8 2168 aaKnown RBP19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 FRMPD4Q14CM0 1322 aa19.95■□□□□ 0.78
UBE2D4-209ENST00000454428 TRIM6-TRIM34B2RNG4 842 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 SPATA31C2B4DYI2 1134 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 NT5C2P49902 561 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 PKN1Q16512 942 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 ANKRD45Q5TZF3 282 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 FCHSD1Q86WN1 690 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 SUGP1Q8IWZ8 645 aaKnown RBP19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 PRRX2Q99811 253 aa19.94■□□□□ 0.78
UBE2D4-209ENST00000454428 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 GCOM1H8Y6P7 765 aaPredicted RBP19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 GFRA3O60609 400 aa19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 POLR2MP0CAP2 368 aa19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 FBXO47Q5MNV8 452 aa19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 UTP14CQ5TAP6 766 aaKnown RBP19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 RTN4RL1Q86UN2 441 aaPredicted RBP19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 USP15Q9Y4E8 981 aaPredicted RBP19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 PCDHGC5Q9Y5F6 944 aa19.93■□□□□ 0.78
UBE2D4-209ENST00000454428 PALM3A6NDB9 673 aaPredicted RBP19.92■□□□□ 0.78
UBE2D4-209ENST00000454428 NEDD9Q14511 834 aa19.92■□□□□ 0.78
UBE2D4-209ENST00000454428 AGO3Q9H9G7 860 aaKnown RBP19.92■□□□□ 0.78
UBE2D4-209ENST00000454428 BARX2Q9UMQ3 279 aaPredicted RBP19.92■□□□□ 0.78
UBE2D4-209ENST00000454428 NRCAMQ92823 1304 aa19.92■□□□□ 0.78
UBE2D4-209ENST00000454428 NRIP1P48552 1158 aa19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 SIGLEC14Q08ET2 396 aa19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 SEC23AQ15436 765 aa19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 KLHL23Q8NBE8 558 aa19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 RTEL1Q9NZ71 1219 aa19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 ZNF215Q9UL58 517 aaPredicted RBP19.91■□□□□ 0.78
UBE2D4-209ENST00000454428 LOXHD1Q8IVV2 1947 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 CYTH3O43739 400 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 SDSP20132 328 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 GNPTABQ3T906 1256 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 NAALADL2Q58DX5 795 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms