RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 PDRG1Q9NUG6 133 aa23.29■■□□□ 1.32
UBE2D4-207ENST00000450743 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
UBE2D4-207ENST00000450743 MYH9P35579 1960 aaKnown RBP23.29■■□□□ 1.32
UBE2D4-207ENST00000450743 MEIS1O00470 390 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 ADAMTS3O15072 1205 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 ARP10275 920 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 GNA11P29992 359 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 ARHGAP4P98171 946 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 RAB30Q15771 203 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 ZNF618Q5T7W0 954 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 MCTP2Q6DN12 878 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 REXO1Q8N1G1 1221 aaKnown RBP23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 ZNF576Q9H609 170 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 SETD4Q9NVD3 440 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 MSRAQ9UJ68 235 aa23.28■■□□□ 1.32
UBE2D4-207ENST00000450743 TREHO43280 583 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 ZNF76P36508 570 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 TRAF7Q6Q0C0 670 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 CRYGNQ8WXF5 182 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 JPH1Q9HDC5 661 aaPredicted RBP23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 SLC9A2Q9UBY0 812 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 NFASCO94856 1347 aa23.27■■□□□ 1.32
UBE2D4-207ENST00000450743 NBNO60934 754 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 CXCL10P02778 98 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 CYP3A4P08684 503 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 GNAT1P11488 350 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 ATP2A2P16615 1042 aaKnown RBP23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 ANAPC15P60006 121 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 NIPA1Q7RTP0 329 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 CCDC148Q8NFR7 591 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 MYLIPQ8WY64 445 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 SDF4Q9BRK5 362 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 AGO4Q9HCK5 861 aaKnown RBP23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 MICAL3Q7RTP6 2002 aa23.26■■□□□ 1.31
UBE2D4-207ENST00000450743 CPLX1O14810 134 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 THPOP40225 353 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 RABGGTBP53611 331 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 ADAM17P78536 824 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 SSRP1Q08945 709 aaKnown RBP23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 STK3Q13188 491 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 ITGB3BPQ13352 177 aaPredicted RBP23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 GRIN2CQ14957 1233 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 TRIM22Q8IYM9 498 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 BICD2Q8TD16 824 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 SMARCAD1Q9H4L7 1026 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 SH3GLB2Q9NR46 395 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 ERAP1Q9NZ08 941 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 VPS54Q9P1Q0 977 aa23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 YBX2Q9Y2T7 364 aaKnown RBP23.25■■□□□ 1.31
UBE2D4-207ENST00000450743 CHD9Q3L8U1 2897 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 FAM86B1E9PN63 330 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 BAIAP3O94812 1187 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 FAM86B2P0C5J1 330 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 MBTPS1Q14703 1052 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 PLA2G4DQ86XP0 818 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 LMBR1Q8WVP7 490 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 GLG1Q92896 1179 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 SLC9A7Q96T83 725 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 NKX2-4Q9H2Z4 354 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 PCDHA11Q9Y5I1 949 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 EMSYQ7Z589 1322 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 NRCAMQ92823 1304 aa23.24■■□□□ 1.31
UBE2D4-207ENST00000450743 LOXHD1Q8IVV2 1947 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 IGLV3-22A0A075B6J6 115 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 LGR5O75473 907 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 ACTR2P61160 394 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 CNKSR3Q6P9H4 555 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 PHOSPHO2Q8TCD6 241 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 RASGRP4Q8TDF6 673 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 PCYT2Q99447 389 aa23.23■■□□□ 1.31
UBE2D4-207ENST00000450743 EVPLQ92817 2033 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 RSPH10B2B2RC85 870 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 DEXIO95424 95 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 RSPH10BP0C881 870 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 MARK3P27448 753 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 CPLX2Q6PUV4 134 aaKnown RBP23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 SLC28A3Q9HAS3 691 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 CDH23Q9H251 3354 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 SIP14410 1827 aa23.22■■□□□ 1.31
UBE2D4-207ENST00000450743 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 CAND2O75155 1236 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 MYOGP15173 224 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 FOSL2P15408 326 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 NLRP5P59047 1200 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 PPFIA1Q13136 1202 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 TCTN1Q2MV58 587 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 SLC17A8Q8NDX2 589 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 IL17RAQ96F46 866 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 AZI2Q9H6S1 392 aa23.21■■□□□ 1.31
UBE2D4-207ENST00000450743 ATG7O95352 703 aa23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 KCNJ6P48051 423 aa23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 WDR5P61964 334 aaKnown RBP23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 GRIK4Q16099 956 aa23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 HERC6Q8IVU3 1022 aa23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 TPCN1Q9ULQ1 816 aa23.2■■□□□ 1.3
UBE2D4-207ENST00000450743 ABHD14A-ACY1A0A1B0GW23 586 aa23.19■■□□□ 1.3
UBE2D4-207ENST00000450743 RBAK-RBAKDNI3L0D1 243 aa23.19■■□□□ 1.3
UBE2D4-207ENST00000450743 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
UBE2D4-207ENST00000450743 IPO5O00410 1097 aaKnown RBP23.19■■□□□ 1.3
UBE2D4-207ENST00000450743 DHX15O43143 795 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms