RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ARHGAP44Q17R89 818 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 CR1LQ2VPA4 569 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 FIGNQ5HY92 759 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 CPZQ66K79 652 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 DDX46Q7L014 1031 aaKnown RBP6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 AMIGO3Q86WK7 504 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 TRIM48Q8IWZ4 208 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 FAM126BQ8IXS8 530 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 AFAP1L2Q8N4X5 818 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 POU5F2Q8N7G0 328 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 TTLL11Q8NHH1 800 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 DLG3Q92796 817 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 ATP23Q9Y6H3 246 aa6.43□□□□□ -1.38
HMGB3P6-201ENST00000444896 SCDO00767 359 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 EYA4O95677 639 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 C4BPAP04003 597 aaKnown RBP6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 NCAM1P13591 858 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 PTPN1P18031 435 aaKnown RBP6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 SOX5P35711 763 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 MC3RP41968 323 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 EPHB3P54753 998 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 PAN2Q504Q3 1202 aaKnown RBP6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 BTBD8Q5XKL5 378 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 IGDCC3Q8IVU1 814 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 FAM26EQ8N5C1 309 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 MZB1Q8WU39 189 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 CPA5Q8WXQ8 436 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 KCNN1Q92952 543 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 SYT3Q9BQG1 590 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 BOCQ9BWV1 1114 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 DTLQ9NZJ0 730 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 HSPBP1Q9NZL4 362 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 H2AFY2Q9P0M6 372 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
HMGB3P6-201ENST00000444896 TCAF2A6NFQ2 919 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 BUB1BO60566 1050 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 SEMA7AO75326 666 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 KRT37O76014 449 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 KRT1P04264 644 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 FAHP16930 419 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 BPIP17213 487 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 IGFBP6P24592 240 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 STAT5AP42229 794 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 RAP1GAPP47736 663 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 SCNN1BP51168 640 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 IRF9Q00978 393 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 CACNB2Q08289 660 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 DHCR24Q15392 516 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 PTPROQ16827 1216 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 ETV3LQ6ZN32 361 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 PROSER1Q86XN7 944 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 SMC1BQ8NDV3 1235 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 CHTF18Q8WVB6 975 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 RNF38Q9H0F5 515 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 PCDH12Q9NPG4 1184 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 B3GALT1Q9Y5Z6 326 aa6.41□□□□□ -1.38
HMGB3P6-201ENST00000444896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 ETV2O00321 342 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 N4BP3O15049 544 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 C8BP07358 591 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 CNGA1P29973 690 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 THBS2P35442 1172 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 ADCYAP1R1P41586 468 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 ID4P47928 161 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 NFKB2Q00653 900 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 STRN3Q13033 797 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 TEPPQ6URK8 271 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 OR2W6PQ8NHA6 318 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 TOE1Q96GM8 510 aaKnown RBP6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 OXSMQ9NWU1 459 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 THG1LQ9NWX6 298 aaKnown RBP6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 ZKSCAN5Q9Y2L8 839 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 COL4A3BPQ9Y5P4 624 aa6.4□□□□□ -1.38
HMGB3P6-201ENST00000444896 RASSF10A6NK89 507 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 C8AP07357 584 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 DLG4P78352 724 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 TARBP2Q15633 366 aaKnown RBP6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZNF124Q15973 351 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 CD300LDQ6UXZ3 194 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 EP400NLQ6ZTU2 488 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 LHFPL2Q6ZUX7 228 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 DDX42Q86XP3 938 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 TMEFF1Q8IYR6 380 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 GPR101Q96P66 508 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 BRINP2Q9C0B6 783 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 KCNH7Q9NS40 1196 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 SPTLC3Q9NUV7 552 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 RBPJLQ9UBG7 517 aa6.39□□□□□ -1.39
HMGB3P6-201ENST00000444896 NEMP1O14524 444 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 TGM5O43548 720 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 GAS7O60861 476 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 FKBP9O95302 570 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 SLC9A1P19634 815 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 SDHAP31040 664 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 GJA4P35212 333 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 FOXO4P98177 505 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 CT47A1Q5JQC4 288 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms