RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CCT6AP40227 531 aaKnown RBP23.67■■□□□ 1.38
VPS13B-204ENST00000441350 ARHGEF6Q15052 776 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 LONRF3Q496Y0 759 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 CAVIN1Q6NZI2 390 aaKnown RBP23.67■■□□□ 1.38
VPS13B-204ENST00000441350 MIER3Q7Z3K6 550 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 CALML4Q96GE6 196 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 USP25Q9UHP3 1055 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 ACTN4O43707 911 aaKnown RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 MED24O75448 989 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 GGPS1O95749 300 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 ZNF865P0CJ78 1059 aaPredicted RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 JAK3P52333 1124 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 ECM1Q16610 540 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TMEM119Q4V9L6 283 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 NAALADL2Q58DX5 795 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 PRAMEF19Q5SWL8 479 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 CELF3Q5SZQ8 465 aaKnown RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TMEM63BQ5T3F8 832 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 METTL7BQ6UX53 244 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 CATSPER3Q86XQ3 398 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 SMAP1Q8IYB5 467 aaPredicted RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TRMT44Q8IYL2 757 aaKnown RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 IQUBQ8NA54 791 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TRIB2Q92519 343 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 DHX58Q96C10 678 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TCEAL9Q9UHQ7 104 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 KDM3AQ9Y4C1 1321 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 WDR64B1ANS9 1081 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 PLCG1P19174 1290 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 ADCYAP1R1P41586 468 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 RRAGBQ5VZM2 374 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 IQSEC1Q6DN90 963 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 KRBA2Q6ZNG9 492 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 LRRC15Q8TF66 581 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 CLSTN2Q9H4D0 955 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TUFT1Q9NNX1 390 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 RGL1Q9NZL6 768 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 NRBP1Q9UHY1 535 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 ZHX1Q9UKY1 873 aaPredicted RBP23.66■■□□□ 1.38
VPS13B-204ENST00000441350 TELO2Q9Y4R8 837 aa23.66■■□□□ 1.38
VPS13B-204ENST00000441350 SLITRK3O94933 977 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 SLFN14P0C7P3 912 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 ACTR2P61160 394 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 ZRSR1Q15695 479 aaKnown RBP23.65■■□□□ 1.38
VPS13B-204ENST00000441350 CCDC144BQ3MJ40 725 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 PDXDC2PQ6P474 469 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 RASSF8Q8NHQ8 419 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 NEK9Q8TD19 979 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 PLIN2Q99541 437 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 NT5C3AQ9H0P0 336 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 SERTAD1Q9UHV2 236 aa23.65■■□□□ 1.38
VPS13B-204ENST00000441350 POTEB3A0JP26 581 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 SORBS3O60504 671 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 ATG7O95352 703 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 STAT6P42226 847 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 CCDC183Q5T5S1 534 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 MFSD14CQ5VZR4 134 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 POTEBQ6S5H4 581 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 COPS5Q92905 334 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 SYAP1Q96A49 352 aaPredicted RBP23.64■■□□□ 1.38
VPS13B-204ENST00000441350 DYDC2Q96IM9 177 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 CDK5RAP3Q96JB5 506 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 SAMM50Q9Y512 469 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 PCDHA10Q9Y5I2 948 aa23.64■■□□□ 1.38
VPS13B-204ENST00000441350 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.63■■□□□ 1.37
VPS13B-204ENST00000441350 MUTP22033 750 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 PRMT2P55345 433 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 CYP4A11Q02928 519 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 ARHGAP1Q07960 439 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 DUSP28Q4G0W2 176 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 ABHD15Q6UXT9 468 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 ELOA2Q8IYF1 753 aaPredicted RBP23.63■■□□□ 1.37
VPS13B-204ENST00000441350 CNNM3Q8NE01 707 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 NUP62CLQ9H1M0 184 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 CUEDC2Q9H467 287 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 MLXIPQ9HAP2 919 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 WDR81Q562E7 1941 aa23.63■■□□□ 1.37
VPS13B-204ENST00000441350 P4HBP07237 508 aaKnown RBP23.62■■□□□ 1.37
VPS13B-204ENST00000441350 SMPD1P17405 629 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
VPS13B-204ENST00000441350 KCTD17Q8N5Z5 321 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 EMID1Q96A84 441 aaPredicted RBP23.62■■□□□ 1.37
VPS13B-204ENST00000441350 BLOC1S4Q9NUP1 217 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 STK17AQ9UEE5 414 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 KIAA1024Q9UPX6 916 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 POTEFA5A3E0 1075 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 NKRFO15226 690 aaKnown RBP eCLIP23.62■■□□□ 1.37
VPS13B-204ENST00000441350 ADCY6O43306 1168 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 GH1P01241 217 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 SP4Q02446 784 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 CTTNQ14247 550 aaKnown RBP23.62■■□□□ 1.37
VPS13B-204ENST00000441350 CAMK4Q16566 473 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 POTEGQ6S5H5 508 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 KCNK18Q7Z418 384 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 CEP57L1Q8IYX8 460 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 TRPV1Q8NER1 839 aa23.62■■□□□ 1.37
VPS13B-204ENST00000441350 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 ADCY3O60266 1144 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 PSAPP07602 524 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 SUPT20HL2P0C7V6 817 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms