RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 UBAC1Q9BSL1 405 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 KRT23Q9C075 422 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 SEMA4AQ9H3S1 761 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 KAT14Q9H8E8 782 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 CNNM2Q9H8M5 875 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
HOXD3-203ENST00000432796 CEP250Q9BV73 2442 aa11.96□□□□□ -0.5
HOXD3-203ENST00000432796 RALGAPA2Q2PPJ7 1873 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
HOXD3-203ENST00000432796 BRD1O95696 1058 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 DNAJB1P25685 340 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 LY6KQ17RY6 165 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 GPATCH4Q5T3I0 446 aaKnown RBP11.95□□□□□ -0.5
HOXD3-203ENST00000432796 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 RNF207Q6ZRF8 634 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 ZNF589Q86UQ0 364 aaPredicted RBP11.95□□□□□ -0.5
HOXD3-203ENST00000432796 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 DSCC1Q9BVC3 393 aa11.95□□□□□ -0.5
HOXD3-203ENST00000432796 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
HOXD3-203ENST00000432796 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 ERICH2A1L162 156 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 NMT2O60551 498 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 CAND2O75155 1236 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 ZNF286BP0CG31 522 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 RPS6P62753 249 aaKnown RBP11.94□□□□□ -0.5
HOXD3-203ENST00000432796 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
HOXD3-203ENST00000432796 HIC1Q14526 733 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 CHST3Q7LGC8 479 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
HOXD3-203ENST00000432796 SPPL3Q8TCT6 385 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 EMID1Q96A84 441 aaPredicted RBP11.94□□□□□ -0.5
HOXD3-203ENST00000432796 TMEM47Q9BQJ4 181 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 OSBPL7Q9BZF2 842 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 MFSD1Q9H3U5 465 aa11.94□□□□□ -0.5
HOXD3-203ENST00000432796 FRMPD2Q68DX3 1309 aaPredicted RBP11.93□□□□□ -0.5
HOXD3-203ENST00000432796 IGHDP01880 384 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 ITGB1P05556 798 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 FGRP09769 529 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 SART3Q15020 963 aaKnown RBP11.93□□□□□ -0.5
HOXD3-203ENST00000432796 ANGPT1Q15389 498 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 DGKHQ86XP1 1220 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 CCDC105Q8IYK2 499 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 ZNF689Q96CS4 500 aaPredicted RBP11.93□□□□□ -0.5
HOXD3-203ENST00000432796 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 TLE6Q9H808 572 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 GPCPD1Q9NPB8 672 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 IL17RBQ9NRM6 502 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 NLRC5Q86WI3 1866 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
HOXD3-203ENST00000432796 FOXP2O15409 715 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 CTSHP09668 335 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 PDHBP11177 359 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 SP100P23497 879 aaPredicted RBP11.92□□□□□ -0.5
HOXD3-203ENST00000432796 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
HOXD3-203ENST00000432796 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
HOXD3-203ENST00000432796 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
HOXD3-203ENST00000432796 VN1R2Q8NFZ6 395 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 PPTC7Q8NI37 304 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
HOXD3-203ENST00000432796 MAP1BP46821 2468 aaKnown RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 AOC1P19801 751 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 SLC16A2P36021 539 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 RBM10P98175 930 aaKnown RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 ZNF543Q08ER8 600 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 TRAF1Q13077 416 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 ASPRV1Q53RT3 343 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 IFIT1BQ5T764 474 aaKnown RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 TBC1D10CQ8IV04 446 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 KLHL23Q8NBE8 558 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 CDCA3Q99618 268 aaPredicted RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 S1PR5Q9H228 398 aa11.91□□□□□ -0.5
HOXD3-203ENST00000432796 MRPL42Q9Y6G3 142 aaKnown RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
HOXD3-203ENST00000432796 NEDD4P46934 1319 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 B4E1Z4 1266 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 DGKIO75912 1065 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 PARP1P09874 1014 aaKnown RBP11.9□□□□□ -0.5
HOXD3-203ENST00000432796 SRGAP2BP0DMP2 458 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 HOXC8P31273 242 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 NOVP48745 357 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 RSPO4Q2I0M5 234 aaPredicted RBP11.9□□□□□ -0.5
HOXD3-203ENST00000432796 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
HOXD3-203ENST00000432796 FLCNQ8NFG4 579 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms