RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 KCNB2Q92953 911 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 GPRASP2Q96D09 838 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 ZBTB10Q96DT7 871 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 PCYT2Q99447 389 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 GJB5O95377 273 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 PARNO95453 639 aaKnown RBP19.62■□□□□ 0.73
CPSF4-203ENST00000430038 CTSHP09668 335 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
CPSF4-203ENST00000430038 GRB10Q13322 594 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 IKBKEQ14164 716 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 PLEKHG4Q58EX7 1191 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 RNF20Q5VTR2 975 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 RUFY4Q6ZNE9 571 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 NLRX1Q86UT6 975 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 TMEM260Q9NX78 707 aa19.62■□□□□ 0.73
CPSF4-203ENST00000430038 KLF18A0A0U1RQI7 1052 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 STXBP3O00186 592 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 ZBTB43O43298 467 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 TFF2Q03403 129 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 RTN1Q16799 776 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 TJAP1Q5JTD0 557 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 MARCH8Q5T0T0 291 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 ASB2Q96Q27 587 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 RIC8AQ9NPQ8 531 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 JADE2Q9NQC1 790 aa19.61■□□□□ 0.73
CPSF4-203ENST00000430038 LINC01553A4QN01 128 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 KIF28PB7ZC32 967 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 CHRNA1P02708 482 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 ARP10275 920 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 APOBRQ0VD83 1088 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 MTMR1Q13613 665 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 ATXN2LQ8WWM7 1075 aaKnown RBP19.6■□□□□ 0.73
CPSF4-203ENST00000430038 THEGQ9P2T0 379 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
CPSF4-203ENST00000430038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-203ENST00000430038 SPDYE3A6NKU9 549 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 MARK3P27448 753 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 CLK2P49760 499 aaKnown RBP19.59■□□□□ 0.73
CPSF4-203ENST00000430038 NAPAP54920 295 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 FAM26DQ5JW98 314 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 SYNE3Q6ZMZ3 975 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 SEPT1Q8WYJ6 367 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 RAD9AQ99638 391 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 MXRA8Q9BRK3 442 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 ZBED2Q9BTP6 218 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 SUGCTQ9HAC7 445 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 KCNH7Q9NS40 1196 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 RBM28Q9NW13 759 aaKnown RBP19.59■□□□□ 0.73
CPSF4-203ENST00000430038 MYO7AQ13402 2215 aa19.59■□□□□ 0.73
CPSF4-203ENST00000430038 GOLGA8AA7E2F4 631 aa19.58■□□□□ 0.72
CPSF4-203ENST00000430038 GOLGA8BA8MQT2 603 aa19.58■□□□□ 0.72
CPSF4-203ENST00000430038 HSPA4P34932 840 aa19.58■□□□□ 0.72
CPSF4-203ENST00000430038 ITGB3BPQ13352 177 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-203ENST00000430038 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.72
CPSF4-203ENST00000430038 MTUS1Q9ULD2 1270 aa19.58■□□□□ 0.72
CPSF4-203ENST00000430038 EMSYQ7Z589 1322 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 NLRC5Q86WI3 1866 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 SMCO2A6NFE2 343 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 PPFIA3O75145 1194 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 ERVK-21P61565 698 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 HTRA4P83105 476 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-203ENST00000430038 MGAT3Q09327 533 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 PKN1Q16512 942 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 Q6ZUG5 572 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 GIMAP8Q8ND71 665 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-203ENST00000430038 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 C17orf80Q9BSJ5 609 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 ANO3Q9BYT9 981 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 ZNF215Q9UL58 517 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-203ENST00000430038 BDP1A6H8Y1 2624 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 EVPLQ92817 2033 aa19.57■□□□□ 0.72
CPSF4-203ENST00000430038 NRCAMQ92823 1304 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 BMP1P13497 986 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 KCNQ1P51787 676 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 MRPS5P82675 430 aaKnown RBP19.56■□□□□ 0.72
CPSF4-203ENST00000430038 MYOCDQ8IZQ8 938 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 BRF1Q92994 677 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 CDHR1Q96JP9 859 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 JAKMIP1Q96N16 626 aaKnown RBP19.56■□□□□ 0.72
CPSF4-203ENST00000430038 NECAB3Q96P71 396 aaPredicted RBP19.56■□□□□ 0.72
CPSF4-203ENST00000430038 ATG2AQ2TAZ0 1938 aa19.56■□□□□ 0.72
CPSF4-203ENST00000430038 MBLAC1A4D2B0 266 aaPredicted RBP19.55■□□□□ 0.72
CPSF4-203ENST00000430038 MEIS1O00470 390 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 EDIL3O43854 480 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 GNAT1P11488 350 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 ADCY7P51828 1080 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 PPFIA1Q13136 1202 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 KRT32Q14532 448 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 GRIK4Q16099 956 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 SP7Q8TDD2 431 aaPredicted RBP19.55■□□□□ 0.72
CPSF4-203ENST00000430038 TRAPPC12Q8WVT3 735 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 DNAJB3Q8WWF6 145 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 CRYGNQ8WXF5 182 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 SYMPKQ92797 1274 aaKnown RBP19.55■□□□□ 0.72
CPSF4-203ENST00000430038 TOP1MTQ969P6 601 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 EHMT1Q9H9B1 1298 aa19.55■□□□□ 0.72
CPSF4-203ENST00000430038 AGO4Q9HCK5 861 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms