RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 STAG3L1P0CL83 205 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 C7P10643 843 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 GNAT1P11488 350 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 RASA1P20936 1047 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 UBE3AQ05086 875 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 APOBRQ0VD83 1088 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 ATAT1Q5SQI0 421 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 RARS2Q5T160 578 aaKnown RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 PDE12Q6L8Q7 609 aaKnown RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 AACSQ86V21 672 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 C1orf210Q8IVY1 113 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 ZDHHC14Q8IZN3 488 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 DNERQ8NFT8 737 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 TCF25Q9BQ70 676 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 CYP26B1Q9NR63 512 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 SPATA6Q9NWH7 488 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 PUF60Q9UHX1 559 aaKnown RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 SMG5Q9UPR3 1016 aaKnown RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 SIT1Q9Y3P8 196 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 PCDHB13Q9Y5F0 798 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 DMDP11532 3685 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 MYO7AQ13402 2215 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 ANKRD11Q6UB99 2663 aaPredicted RBP7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ATG2AQ2TAZ0 1938 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 USP24Q9UPU5 2620 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ENPP3O14638 875 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 SPTLC1O15269 473 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 TREHO43280 583 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 LAMTOR5O43504 91 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 FGF18O76093 207 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 PROS1P07225 676 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 LINC00271P0C7V0 271 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ARP10275 920 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 RPS6P62753 249 aaKnown RBP7.45□□□□□ -1.22
SDCBP-203ENST00000424270 NONOQ15233 471 aaKnown RBP eCLIP7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ALDH1L2Q3SY69 923 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 IL31Q6EBC2 164 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 SUMF1Q8NBK3 374 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 PPTC7Q8NI37 304 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 NETO1Q8TDF5 533 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 GMCL1Q96IK5 515 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 OSBPL7Q9BZF2 842 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ADAM7Q9H2U9 754 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 TBC1D17Q9HA65 648 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 MTMR4Q9NYA4 1195 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 ZMIZ1Q9ULJ6 1067 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 SYNPO2Q9UMS6 1093 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 DUSP12Q9UNI6 340 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 STX8Q9UNK0 236 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
SDCBP-203ENST00000424270 EIF4E1BA6NMX2 242 aaKnown RBP7.44□□□□□ -1.22
SDCBP-203ENST00000424270 BCAR3O75815 825 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 APPP05067 770 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 SMIM10L2BP0DMW5 78 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 SLC16A2P36021 539 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 TDO2P48775 406 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 ERVFC1P60507 584 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 ARHGAP4P98171 946 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 CSTF1Q05048 431 aaKnown RBP7.44□□□□□ -1.22
SDCBP-203ENST00000424270 SPEM2Q0P670 501 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 GSE1Q14687 1217 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 STXBP2Q15833 593 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 RCSD1Q6JBY9 416 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 OTOP3Q7RTS5 596 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 TMC7Q7Z402 723 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 RSPH3Q86UC2 560 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 NPAS4Q8IUM7 802 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 CRIPAKQ8N1N5 446 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 DDX1Q92499 740 aaKnown RBP7.44□□□□□ -1.22
SDCBP-203ENST00000424270 MKL1Q969V6 931 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 EAF2Q96CJ1 260 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-203ENST00000424270 ZNF689Q96CS4 500 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-203ENST00000424270 MRS2Q9HD23 443 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 METRNQ9UJH8 293 aa7.44□□□□□ -1.22
SDCBP-203ENST00000424270 FAM208BQ5VWN6 2430 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 TCRBV5S4A2TA0A5A2 114 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 TBKBP1A7MCY6 615 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 H3BRB1 525 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 HAS3O00219 553 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 NOP56O00567 594 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 SLC30A4O14863 429 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 NARSO43776 548 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 PPFIA4O75335 1185 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 EOMESO95936 686 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 SLC3A2P08195 630 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 EDNRBP24530 442 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 GATMP50440 423 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 HIC1Q14526 733 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 BMS1Q14692 1282 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 LPAL2Q16609 132 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 USH1GQ495M9 461 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 SLFNL1Q499Z3 407 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 CCDC184Q52MB2 194 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 PPP4R3BQ5MIZ7 849 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 ARHGEF16Q5VV41 709 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 CCDC62Q6P9F0 684 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms