RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 MXRA8Q9BRK3 442 aa29.18■■■□□ 2.26
SMDT1-202ENST00000422252 ANO3Q9BYT9 981 aa29.18■■■□□ 2.26
SMDT1-202ENST00000422252 NID2Q14112 1375 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 ABHD14A-ACY1A0A1B0GW23 586 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 GSTTP1A0A1W2PQM5 241 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 PFKFB3Q16875 520 aaPredicted RBP29.17■■■□□ 2.26
SMDT1-202ENST00000422252 TCTN1Q2MV58 587 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 USP38Q8NB14 1042 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 AGXT2Q9BYV1 514 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 PRUNE2Q8WUY3 3088 aa29.17■■■□□ 2.26
SMDT1-202ENST00000422252 EPB41L2O43491 1005 aaKnown RBP29.16■■■□□ 2.26
SMDT1-202ENST00000422252 EFCAB14O75071 495 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 CAND2O75155 1236 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 LGR5O75473 907 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 AP3B2Q13367 1082 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 IKBKEQ14164 716 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 KCNH7Q9NS40 1196 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 CHD7Q9P2D1 2997 aa29.16■■■□□ 2.26
SMDT1-202ENST00000422252 SCG2P13521 617 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 IGFBP4P22692 258 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 CLK2P49760 499 aaKnown RBP29.15■■■□□ 2.26
SMDT1-202ENST00000422252 ADAM17P78536 824 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 ARHGAP4P98171 946 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 LMBR1Q8WVP7 490 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 TMEM260Q9NX78 707 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 NRCAMQ92823 1304 aa29.15■■■□□ 2.26
SMDT1-202ENST00000422252 MYO9BQ13459 2157 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 TLL1O43897 1013 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 DEFB103AP81534 67 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 CEP55Q53EZ4 464 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 CYP2W1Q8TAV3 490 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 JPH1Q9HDC5 661 aaPredicted RBP29.14■■■□□ 2.26
SMDT1-202ENST00000422252 ERAP1Q9NZ08 941 aa29.14■■■□□ 2.26
SMDT1-202ENST00000422252 SREBF1P36956 1147 aa29.13■■■□□ 2.25
SMDT1-202ENST00000422252 PPM1EQ8WY54 764 aa29.13■■■□□ 2.25
SMDT1-202ENST00000422252 GLG1Q92896 1179 aa29.13■■■□□ 2.25
SMDT1-202ENST00000422252 SMARCAD1Q9H4L7 1026 aa29.13■■■□□ 2.25
SMDT1-202ENST00000422252 SLC9A2Q9UBY0 812 aa29.13■■■□□ 2.25
SMDT1-202ENST00000422252 PTPRSQ13332 1948 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 PRPF3O43395 683 aaKnown RBP29.12■■■□□ 2.25
SMDT1-202ENST00000422252 CTSHP09668 335 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 TAP1Q03518 808 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 TMCO2Q7Z6W1 182 aaPredicted RBP29.12■■■□□ 2.25
SMDT1-202ENST00000422252 DBF4BQ8NFT6 615 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 SDF4Q9BRK5 362 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 ZBED2Q9BTP6 218 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 NFASCO94856 1347 aa29.12■■■□□ 2.25
SMDT1-202ENST00000422252 ESYT2A0FGR8 921 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 RBAK-RBAKDNI3L0D1 243 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 ARHGEF15O94989 841 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 ARP10275 920 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 MARK3P27448 753 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 PPFIA1Q13136 1202 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 PKN1Q16512 942 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 PLEKHG4Q58EX7 1191 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 CCDC12Q8WUD4 166 aaPredicted RBP29.11■■■□□ 2.25
SMDT1-202ENST00000422252 COL25A1Q9BXS0 654 aaPredicted RBP29.11■■■□□ 2.25
SMDT1-202ENST00000422252 ZMYND12Q9H0C1 365 aa29.11■■■□□ 2.25
SMDT1-202ENST00000422252 JAKMIP3Q5VZ66 844 aa29.1■■■□□ 2.25
SMDT1-202ENST00000422252 RUFY3Q7L099 469 aa29.1■■■□□ 2.25
SMDT1-202ENST00000422252 PHKBQ93100 1093 aa29.1■■■□□ 2.25
SMDT1-202ENST00000422252 CERS4Q9HA82 394 aa29.1■■■□□ 2.25
SMDT1-202ENST00000422252 AGO4Q9HCK5 861 aaKnown RBP29.1■■■□□ 2.25
SMDT1-202ENST00000422252 C6orf50Q9HD87 102 aa29.1■■■□□ 2.25
SMDT1-202ENST00000422252 MEIS1O00470 390 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 GJB5O95377 273 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 ZNF76P36508 570 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 EVCP57679 992 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 AKAP17AQ02040 695 aaKnown RBP29.09■■■□□ 2.25
SMDT1-202ENST00000422252 GRIK4Q16099 956 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 NTRK3Q16288 839 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 PCYT2Q99447 389 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 ZSWIM6Q9HCJ5 1215 aa29.09■■■□□ 2.25
SMDT1-202ENST00000422252 PDIA3P30101 505 aaKnown RBP29.08■■■□□ 2.25
SMDT1-202ENST00000422252 ITGB3BPQ13352 177 aaPredicted RBP29.08■■■□□ 2.25
SMDT1-202ENST00000422252 MKRN4PQ13434 485 aaPredicted RBP29.08■■■□□ 2.25
SMDT1-202ENST00000422252 CCDC85BQ15834 202 aaPredicted RBP29.08■■■□□ 2.25
SMDT1-202ENST00000422252 FAM26DQ5JW98 314 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 MCTP2Q6DN12 878 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 TAF2Q6P1X5 1199 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 NIPA1Q7RTP0 329 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 SEPT8Q92599 483 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 RAD9AQ99638 391 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 RNF26Q9BY78 433 aaPredicted RBP29.08■■■□□ 2.25
SMDT1-202ENST00000422252 AZI2Q9H6S1 392 aa29.08■■■□□ 2.25
SMDT1-202ENST00000422252 LCHNA4D1U4 455 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 ACTR2P61160 394 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.07■■■□□ 2.24
SMDT1-202ENST00000422252 RUFY4Q6ZNE9 571 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 RPAINQ86UA6 219 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 REXO1Q8N1G1 1221 aaKnown RBP29.07■■■□□ 2.24
SMDT1-202ENST00000422252 ARNTL2Q8WYA1 636 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 KAT6AQ92794 2004 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 TUBE1Q9UJT0 475 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 CYP46A1Q9Y6A2 500 aa29.07■■■□□ 2.24
SMDT1-202ENST00000422252 EPOPA6NHQ4 379 aa29.06■■■□□ 2.24
SMDT1-202ENST00000422252 RFXAPO00287 272 aa29.06■■■□□ 2.24
SMDT1-202ENST00000422252 AMHP03971 560 aa29.06■■■□□ 2.24
SMDT1-202ENST00000422252 CYP3A4P08684 503 aa29.06■■■□□ 2.24
SMDT1-202ENST00000422252 IFNAR1P17181 557 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms