RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 LZTS2Q9BRK4 669 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 RWDD3Q9Y3V2 267 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 ARIH1Q9Y4X5 557 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 FRMPD4Q14CM0 1322 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 MICAL3Q7RTP6 2002 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 BDP1A6H8Y1 2624 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 DDAH1O94760 285 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 HOXC8P31273 242 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 PPFIA1Q13136 1202 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 SLC35G1Q2M3R5 365 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 TCEAL5Q5H9L2 206 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 TAF2Q6P1X5 1199 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 ZNF654Q8IZM8 581 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 SPZ1Q9BXG8 430 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 EHMT1Q9H9B1 1298 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 SENP2Q9HC62 589 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 CLDND1Q9NY35 253 aa17.9■□□□□ 0.46
SBDSP1-201ENST00000415772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 GRXCR2A6NFK2 248 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 SPDYE3A6NKU9 549 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 GHRP10912 638 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 CHMLP26374 656 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 MARK3P27448 753 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 KHSRPQ92945 711 aaKnown RBP eCLIP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 TNPO1Q92973 898 aaKnown RBP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 PABPC5Q96DU9 382 aaKnown RBP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 MAP3K14Q99558 947 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 C11orf84Q9BUA3 381 aaPredicted RBP17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 MYL10Q9BUA6 226 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 ERAP1Q9NZ08 941 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 PKD2L1Q9P0L9 805 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 TUBE1Q9UJT0 475 aa17.89■□□□□ 0.45
SBDSP1-201ENST00000415772 M0QZ92 97 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 NCK2O43639 380 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 RB1P06400 928 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 IGBP1P78318 339 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 SEMA3FQ13275 785 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 FAM26DQ5JW98 314 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 TMTC2Q8N394 836 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 SEPT1Q8WYJ6 367 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 GPRASP2Q96D09 838 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 CD320Q9NPF0 282 aa17.88■□□□□ 0.45
SBDSP1-201ENST00000415772 PRR33A8MZF0 331 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 RBAK-RBAKDNI3L0D1 243 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 PIK3CDO00329 1044 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 CSPG5O95196 566 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 RPLP2P05387 115 aaKnown RBP17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 CALM1P0DP23 149 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 CALM2P0DP24 149 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 CALM3P0DP25 149 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 SMARCA1P28370 1054 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 MTMR1Q13613 665 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 BTG3Q14201 252 aaPredicted RBP17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 GRIK4Q16099 956 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 PPP2R3CQ969Q6 453 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 LMAN2LQ9H0V9 348 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 SMARCAD1Q9H4L7 1026 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 AZI2Q9H6S1 392 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 ADGRA3Q8IWK6 1321 aa17.87■□□□□ 0.45
SBDSP1-201ENST00000415772 PRC1O43663 620 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 PDE4AP27815 886 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 MCM5P33992 734 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 IRX6P78412 446 aaPredicted RBP17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 NEK9Q8TD19 979 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 DNAJB3Q8WWF6 145 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 COL4A6Q14031 1691 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 DOCK5Q9H7D0 1870 aa17.86■□□□□ 0.45
SBDSP1-201ENST00000415772 MEIS2O14770 477 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 SGSM2O43147 1006 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 CHRNA1P02708 482 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 BMPR1AP36894 532 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 ANTXR2P58335 489 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 ADAM17P78536 824 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 RALGAPA2Q2PPJ7 1873 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 IER5Q5VY09 327 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 RUFY4Q6ZNE9 571 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 RPAINQ86UA6 219 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 NLRC5Q86WI3 1866 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 TMEM87BQ96K49 555 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 FAM49AQ9H0Q0 323 aaPredicted RBP17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 LY9Q9HBG7 655 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 PRKAG3Q9UGI9 489 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 TRPC6Q9Y210 931 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 CDY2AQ9Y6F7 541 aa17.85■□□□□ 0.45
SBDSP1-201ENST00000415772 RRN3P2A6NIE6 340 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 DCXO43602 365 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 PLEKHA8P1O95397 391 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 LPIN1Q14693 890 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 TSHZ1Q6ZSZ6 1077 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
SBDSP1-201ENST00000415772 CCDC82Q8N4S0 544 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms