RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PCDHA1Q9Y5I3 950 aa19.36■□□□□ 0.69
CHMP3-203ENST00000409225 B4E1Z4 1266 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 CHRNA1P02708 482 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 PDE1AP54750 535 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 ZXDAP98168 799 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 CYFIP1Q7L576 1253 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 LMBR1Q8WVP7 490 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 PRRX2Q99811 253 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 FAM86C1Q9NVL1 165 aa19.35■□□□□ 0.69
CHMP3-203ENST00000409225 USP34Q70CQ2 3546 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 ENPP3O14638 875 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 ZBTB5O15062 677 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 EYA4O95677 639 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 CAMK1Q14012 370 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 PKN1Q16512 942 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 RUFY4Q6ZNE9 571 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 ADGRD2Q7Z7M1 963 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 PPP2R3CQ969Q6 453 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 ZNF689Q96CS4 500 aaPredicted RBP19.34■□□□□ 0.69
CHMP3-203ENST00000409225 GPR20Q99678 358 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 PLVAPQ9BX97 442 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 ZNF215Q9UL58 517 aaPredicted RBP19.34■□□□□ 0.69
CHMP3-203ENST00000409225 PLAGL2Q9UPG8 496 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 TELO2Q9Y4R8 837 aa19.34■□□□□ 0.69
CHMP3-203ENST00000409225 LOC730098B7Z3J9 87 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 KLRF2D3W0D1 207 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 GCOM1H8Y6P7 765 aaPredicted RBP19.33■□□□□ 0.68
CHMP3-203ENST00000409225 GFRA3O60609 400 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 POLR2MP0CAP2 368 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 DNAJB1P25685 340 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 MFAP1P55081 439 aaKnown RBP19.33■□□□□ 0.68
CHMP3-203ENST00000409225 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
CHMP3-203ENST00000409225 ADAM17P78536 824 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 SP4Q02446 784 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 NEDD9Q14511 834 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 LPIN1Q14693 890 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 GNPTABQ3T906 1256 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 METTL7BQ6UX53 244 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 HOMER1Q86YM7 354 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 FBXL6Q8N531 539 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 SAMD3Q8N6K7 520 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 EHMT1Q9H9B1 1298 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 CLEC1BQ9P126 229 aa19.33■□□□□ 0.68
CHMP3-203ENST00000409225 ITGB1P05556 798 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 NT5C2P49902 561 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 EFHBQ8N7U6 833 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 SMRP1Q8NCR6 262 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 RILPL2Q969X0 211 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 MTMR8Q96EF0 704 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 RTEL1Q9NZ71 1219 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 ZSWIM5Q9P217 1185 aa19.32■□□□□ 0.68
CHMP3-203ENST00000409225 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
CHMP3-203ENST00000409225 DOCK5Q9H7D0 1870 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 LAMA4Q16363 1823 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 SPATA31C2B4DYI2 1134 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 DGKIO75912 1065 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 ICAM3P32942 547 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 NRIP1P48552 1158 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 MRPS9P82933 396 aaKnown RBP19.31■□□□□ 0.68
CHMP3-203ENST00000409225 MGAT3Q09327 533 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 SEMA3FQ13275 785 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 IFIT1BQ5T764 474 aaKnown RBP19.31■□□□□ 0.68
CHMP3-203ENST00000409225 RBM23Q86U06 439 aaKnown RBP19.31■□□□□ 0.68
CHMP3-203ENST00000409225 TICAM2Q86XR7 235 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 SPPL3Q8TCT6 385 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 P2RX5Q93086 422 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 MAD2L2Q9UI95 211 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 BARX2Q9UMQ3 279 aaPredicted RBP19.31■□□□□ 0.68
CHMP3-203ENST00000409225 USP15Q9Y4E8 981 aaPredicted RBP19.31■□□□□ 0.68
CHMP3-203ENST00000409225 KMT2EQ8IZD2 1858 aa19.31■□□□□ 0.68
CHMP3-203ENST00000409225 ZDBF2Q9HCK1 2354 aa19.3■□□□□ 0.68
CHMP3-203ENST00000409225 NRCAMQ92823 1304 aa19.3■□□□□ 0.68
CHMP3-203ENST00000409225 VCPP55072 806 aaKnown RBP19.3■□□□□ 0.68
CHMP3-203ENST00000409225 COASYQ13057 564 aa19.3■□□□□ 0.68
CHMP3-203ENST00000409225 CBX2Q14781 532 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-203ENST00000409225 PAN2Q504Q3 1202 aaKnown RBP19.3■□□□□ 0.68
CHMP3-203ENST00000409225 RPGRIP1Q96KN7 1286 aa19.3■□□□□ 0.68
CHMP3-203ENST00000409225 INPP4AQ96PE3 977 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-203ENST00000409225 FIBPO43427 364 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 GLP2RO95838 553 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 SIGLEC14Q08ET2 396 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 FBXO47Q5MNV8 452 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 TAF2Q6P1X5 1199 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 RSPH3Q86UC2 560 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 KLHL23Q8NBE8 558 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 POF1BQ8WVV4 589 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 LINC01599Q8WXQ3 324 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 ATOH1Q92858 354 aaPredicted RBP19.29■□□□□ 0.68
CHMP3-203ENST00000409225 PIGSQ96S52 555 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 PCDHGC5Q9Y5F6 944 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 TTC3P53804 2025 aa19.29■□□□□ 0.68
CHMP3-203ENST00000409225 KIAA1671Q9BY89 1806 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 STAM2O75886 525 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 SDSP20132 328 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 PPFIA1Q13136 1202 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 SLC35G1Q2M3R5 365 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 NAALADL2Q58DX5 795 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 TSHZ1Q6ZSZ6 1077 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 CMTR2Q8IYT2 770 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms