RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TRAF3IP3Q9Y228 551 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 MEIS1O00470 390 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 TBX3O15119 743 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 ENTPD3O75355 529 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-202ENST00000394888 KRT83P78385 493 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 RAD51AP2Q09MP3 1159 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 SYDE2Q5VT97 1194 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 CEP63Q96MT8 703 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 ARGLU1Q9NWB6 273 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-202ENST00000394888 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
CPSF7-202ENST00000394888 MYBP10242 640 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 KCNA3P22001 575 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 FKBP3Q00688 224 aaKnown RBP17.03■□□□□ 0.32
CPSF7-202ENST00000394888 EZH2Q15910 746 aaKnown RBP17.03■□□□□ 0.32
CPSF7-202ENST00000394888 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 SAR1BQ9Y6B6 198 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 ZBTB39O15060 712 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 MOCS3O95396 460 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 APBA3O96018 575 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 HDAC7Q8WUI4 952 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 ZNF622Q969S3 477 aaKnown RBP eCLIP17.03■□□□□ 0.327e-7■□□□□ 9.5
CPSF7-202ENST00000394888 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 KIF20AO95235 890 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 USH1GQ495M9 461 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 PRR16Q569H4 304 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 KLHDC7AQ5VTJ3 777 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
CPSF7-202ENST00000394888 SMARCAL1Q9NZC9 954 aa17.03■□□□□ 0.32
CPSF7-202ENST00000394888 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 IQCDQ96DY2 449 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 MACROD2A1Z1Q3 448 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CTAGE15A4D2H0 777 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 PSMD10O75832 226 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CTAGE8P0CG41 777 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CYLC1P35663 651 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-202ENST00000394888 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 IRF2BP2Q7Z5L9 587 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CTAGE6Q86UF2 777 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CTAGE4Q8IX94 777 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 EDEM3Q9BZQ6 932 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 CEP72Q9P209 647 aa17.02■□□□□ 0.32
CPSF7-202ENST00000394888 TGFB1I1O43294 461 aa17.02■□□□□ 0.31
CPSF7-202ENST00000394888 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.31
CPSF7-202ENST00000394888 SYN2Q92777 582 aaPredicted RBP17.02■□□□□ 0.31
CPSF7-202ENST00000394888 EMILIN3Q9NT22 766 aa17.02■□□□□ 0.31
CPSF7-202ENST00000394888 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 EDRF1Q3B7T1 1238 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 GLIS2Q9BZE0 524 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-202ENST00000394888 POLD4Q9HCU8 107 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SYNPO2Q9UMS6 1093 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 KIAA1217Q5T5P2 1943 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SYF2O95926 243 aaKnown RBP17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 AIPL1Q9NZN9 384 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 PRLRP16471 622 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 FKBP15Q5T1M5 1219 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SFR1Q86XK3 245 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SLFN12Q8IYM2 578 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
CPSF7-202ENST00000394888 CCDC47Q96A33 483 aaKnown RBP17.01■□□□□ 0.31
CPSF7-202ENST00000394888 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-202ENST00000394888 RANBP17Q9H2T7 1088 aaKnown RBP17.01■□□□□ 0.31
CPSF7-202ENST00000394888 AGPSO00116 658 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 NCK2O43639 380 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 AKAP3O75969 853 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 STRA6Q9BX79 667 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 PACSIN1Q9BY11 444 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 IFIH1Q9BYX4 1025 aaKnown RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 PDE11AQ9HCR9 933 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 RGL1Q9NZL6 768 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 KRT86O43790 486 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 SLITRK3O94933 977 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 BMP3P12645 472 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 ACTN1P12814 892 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 JAM2P57087 298 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 C2orf54Q08AI8 447 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 CASP8Q14790 479 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 NFRKBQ6P4R8 1299 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 CASP4P49662 377 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
CPSF7-202ENST00000394888 ZBTB9Q96C00 473 aa17■□□□□ 0.31
CPSF7-202ENST00000394888 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 POLR3CQ9BUI4 534 aaPredicted RBP17■□□□□ 0.31
CPSF7-202ENST00000394888 TMX2Q9Y320 296 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms