RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 TRIM51Q9BSJ1 452 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 CEP72Q9P209 647 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
LRRC40-201ENST00000370952 CASZ1Q86V15 1759 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 EME2A4GXA9 379 aaPredicted RBP10.57□□□□□ -0.72
LRRC40-201ENST00000370952 EIF4E1BA6NMX2 242 aaKnown RBP10.57□□□□□ -0.72
LRRC40-201ENST00000370952 TRAF5O00463 557 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 SHBGP04278 402 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 GHRP10912 638 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 KIF5BP33176 963 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 NBPF9Q3BBW0 867 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 LRRC34Q8IZ02 419 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 METTL13Q8N6R0 699 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ELAC2Q9BQ52 826 aaKnown RBP10.57□□□□□ -0.72
LRRC40-201ENST00000370952 FAM129AQ9BZQ8 928 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 BLOC1S4Q9NUP1 217 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 PANK4Q9NVE7 773 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 TBC1D7Q9P0N9 293 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ADAMTSL3P82987 1691 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 NUP98P52948 1817 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 STARD3NLO95772 234 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 MMEP08473 750 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 GOLGA8HP0CJ92 632 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 PPP1R2P41236 205 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 ARMC9Q7Z3E5 817 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 UHMK1Q8TAS1 419 aaKnown RBP10.56□□□□□ -0.72
LRRC40-201ENST00000370952 AGAP11Q8TF27 550 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 PRCCQ92733 491 aaPredicted RBP10.56□□□□□ -0.72
LRRC40-201ENST00000370952 CALML4Q96GE6 196 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 MAGEF1Q9HAY2 307 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.56□□□□□ -0.72
LRRC40-201ENST00000370952 AGAP1Q9UPQ3 857 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 C1orf167Q5SNV9 1468 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 PGRMC1O00264 195 aaKnown RBP10.56□□□□□ -0.72
LRRC40-201ENST00000370952 CYTH3O43739 400 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 COPB2P35606 906 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 IFNAR2P48551 515 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 USP11P51784 963 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 KCNJ2P63252 427 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 GRB10Q13322 594 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 MTMR3Q13615 1198 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 UNC13DQ70J99 1090 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 ADAT2Q7Z6V5 191 aaKnown RBP10.56□□□□□ -0.72
LRRC40-201ENST00000370952 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 LMBR1Q8WVP7 490 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 HOOK2Q96ED9 719 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 BRIP1Q9BX63 1249 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 KIF9Q9HAQ2 790 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 ABCF3Q9NUQ8 709 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 C15orf41Q9Y2V0 281 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 TNS2Q63HR2 1409 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 PAPPAQ13219 1627 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
LRRC40-201ENST00000370952 FGFR1OPO95684 399 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 FGRP09769 529 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 CHRNDQ07001 517 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ASIC2Q16515 512 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 GUF1Q8N442 669 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 EBF2Q9HAK2 575 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 CD2APQ9Y5K6 639 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 CACNA1SQ13698 1873 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 A8MUI8 341 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 STXBP3O00186 592 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 DIAPH2O60879 1101 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 VIMP08670 466 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ACTN1P12814 892 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 PRPHP41219 470 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 BIRC2Q13490 618 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 NELFCDQ8IXH7 590 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ANKS4BQ8N8V4 417 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 MAB21L3Q8N8X9 362 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 P3H4Q92791 437 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 AK8Q96MA6 479 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 PNMA5Q96PV4 448 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■■□ 24.6
LRRC40-201ENST00000370952 EDEM3Q9BZQ6 932 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 COL1A1P02452 1464 aaPredicted RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 A0A0G2JS52 829 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 LAD1O00515 517 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 SLC8A3P57103 927 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 TFAP4Q01664 338 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 PTK2Q05397 1052 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 LRRC63Q05C16 580 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 MICAL1Q8TDZ2 1067 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms