RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 IPO5O00410 1097 aaKnown RBP22.6■■□□□ 1.21
H3F3A-204ENST00000366816 DHX15O43143 795 aaKnown RBP22.6■■□□□ 1.21
H3F3A-204ENST00000366816 CSF2RAP15509 400 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 FPGSQ05932 587 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 NONOQ15233 471 aaKnown RBP eCLIP22.6■■□□□ 1.21
H3F3A-204ENST00000366816 EARS2Q5JPH6 523 aaKnown RBP22.6■■□□□ 1.21
H3F3A-204ENST00000366816 C9orf50Q5SZB4 431 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 GJA10Q969M2 543 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 LENG9Q96B70 501 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 ZNF577Q9BSK1 485 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 TRIOBPQ9H2D6 2365 aa22.6■■□□□ 1.21
H3F3A-204ENST00000366816 RBAK-RBAKDNI3L0D1 243 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 TDP2O95551 362 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 CCNE2O96020 404 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 SMIM10L2AP0DMW4 78 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 SMIM10L2BP0DMW5 78 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 ACTR2P61160 394 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 GUCY1B3Q02153 619 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 NR5A1Q13285 461 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 SHHQ15465 462 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 KRT25Q7Z3Z0 450 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 TDHQ8IZJ6 230 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 PCYT2Q99447 389 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 LLPHQ9BRT6 129 aaKnown RBP22.59■■□□□ 1.21
H3F3A-204ENST00000366816 WNT8AQ9H1J5 351 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 RNPEPQ9H4A4 650 aa22.59■■□□□ 1.21
H3F3A-204ENST00000366816 CCDC194A0A1B0GVG4 234 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 FAM205CA6NFA0 338 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 MARK3P27448 753 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 SETQ01105 290 aaPredicted RBP22.58■■□□□ 1.21
H3F3A-204ENST00000366816 KRT40Q6A162 431 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 PIK3AP1Q6ZUJ8 805 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 TMEM199Q8N511 208 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 GLG1Q92896 1179 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 SCLYQ96I15 445 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 SETD4Q9NVD3 440 aa22.58■■□□□ 1.21
H3F3A-204ENST00000366816 ZNF215Q9UL58 517 aaPredicted RBP22.58■■□□□ 1.21
H3F3A-204ENST00000366816 MSH4O15457 936 aa22.57■■□□□ 1.2
H3F3A-204ENST00000366816 ACRP10323 421 aa22.57■■□□□ 1.2
H3F3A-204ENST00000366816 KRT2P35908 639 aa22.57■■□□□ 1.2
H3F3A-204ENST00000366816 C16orf59Q7L2K0 433 aa22.57■■□□□ 1.2
H3F3A-204ENST00000366816 DHX38Q92620 1227 aaKnown RBP22.57■■□□□ 1.2
H3F3A-204ENST00000366816 A0A1W2PPC1 479 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 BTBD18B2RXH4 712 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 MMP1P03956 469 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 TRIM29Q14134 588 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 LETM2Q2VYF4 491 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 WNT8BQ93098 351 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 TMX3Q96JJ7 454 aa22.56■■□□□ 1.2
H3F3A-204ENST00000366816 CYP3A7-CYP3A51PA0A087WV96 503 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 C17orf102A2RUQ5 167 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 SOX1O00570 391 aaPredicted RBP22.55■■□□□ 1.2
H3F3A-204ENST00000366816 LGR5O75473 907 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 ATG7O95352 703 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 CYP3A7P24462 503 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 FXR1P51114 621 aaKnown RBP eCLIP22.55■■□□□ 1.2
H3F3A-204ENST00000366816 DIS3L2Q8IYB7 885 aaKnown RBP22.55■■□□□ 1.2
H3F3A-204ENST00000366816 TNFRSF25Q93038 417 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 SMARCAD1Q9H4L7 1026 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 TBC1D22BQ9NU19 505 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 ERAP1Q9NZ08 941 aa22.55■■□□□ 1.2
H3F3A-204ENST00000366816 TREHO43280 583 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 PPIGQ13427 754 aaKnown RBP eCLIP22.54■■□□□ 1.2
H3F3A-204ENST00000366816 Q4G0T1 1027 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 ABHD15Q6UXT9 468 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 RETREG2Q8NC44 543 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 ATP6V0A1Q93050 837 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.54■■□□□ 1.23e-8■■■■□ 19.6
H3F3A-204ENST00000366816 AZI2Q9H6S1 392 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 BRMS1Q9HCU9 246 aa22.54■■□□□ 1.2
H3F3A-204ENST00000366816 DDX25Q9UHL0 483 aaKnown RBP22.54■■□□□ 1.2
H3F3A-204ENST00000366816 SLC37A4O43826 429 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 HOXC8P31273 242 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 STAT5BP51692 787 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 BFSP2Q13515 415 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 NEK8Q86SG6 692 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 FAM184AQ8NB25 1140 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 SLC5A5Q92911 643 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 VWCEQ96DN2 955 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 C8orf76Q96K31 380 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 MBOAT7Q96N66 472 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 EMSYQ7Z589 1322 aa22.53■■□□□ 1.2
H3F3A-204ENST00000366816 PITPNM1O00562 1244 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 BACH1O14867 736 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 CCNT1O60563 726 aaKnown RBP22.52■■□□□ 1.2
H3F3A-204ENST00000366816 IQCF3P0C7M6 154 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 HMGN5P82970 282 aaKnown RBP22.52■■□□□ 1.2
H3F3A-204ENST00000366816 PTK7Q13308 1070 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 TMEM240Q5SV17 173 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 SWSAP1Q6NVH7 229 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 ZNF365Q70YC5 407 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 DEFB128Q7Z7B8 93 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 CCDC60Q8IWA6 550 aaPredicted RBP22.52■■□□□ 1.2
H3F3A-204ENST00000366816 LMBR1Q8WVP7 490 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 IL23AQ9NPF7 189 aa22.52■■□□□ 1.2
H3F3A-204ENST00000366816 TRIP12Q14669 1992 aaPredicted RBP22.51■■□□□ 1.19
H3F3A-204ENST00000366816 IGKV6D-21A0A0A0MT36 114 aa22.51■■□□□ 1.19
H3F3A-204ENST00000366816 CHMP2AO43633 222 aa22.51■■□□□ 1.19
H3F3A-204ENST00000366816 GAS7O60861 476 aa22.51■■□□□ 1.19
H3F3A-204ENST00000366816 CKBP12277 381 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms