RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 TRIM59Q8IWR1 403 aa26.43■■□□□ 1.82
DDX42-201ENST00000359353 RUBCNQ92622 972 aa26.43■■□□□ 1.82
DDX42-201ENST00000359353 DDX47Q9H0S4 455 aaKnown RBP26.43■■□□□ 1.82
DDX42-201ENST00000359353 NEUROG2Q9H2A3 272 aa26.43■■□□□ 1.82
DDX42-201ENST00000359353 BCCIPQ9P287 314 aaKnown RBP eCLIP26.43■■□□□ 1.82
DDX42-201ENST00000359353 USP17L15C9J2P7 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L13C9JLJ4 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L11C9JVI0 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L18D6R9N7 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L22D6RA61 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L17D6RBQ6 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L19D6RCP7 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L20D6RJB6 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 KRT18P05783 430 aaKnown RBP26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L24Q0WX57 530 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 KCNH2Q12809 1159 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP17L6PQ6QN14 398 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 KCTD1Q719H9 257 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 USP38Q8NB14 1042 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 PCDHGC5Q9Y5F6 944 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 SBF2Q86WG5 1849 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 LDHCP07864 332 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 HNRNPH1P31943 449 aaKnown RBP26.42■■□□□ 1.82
DDX42-201ENST00000359353 CDC37Q16543 378 aaPredicted RBP26.42■■□□□ 1.82
DDX42-201ENST00000359353 RNF187Q5TA31 235 aaPredicted RBP26.42■■□□□ 1.82
DDX42-201ENST00000359353 ZNF571Q7Z3V5 609 aaPredicted RBP26.42■■□□□ 1.82
DDX42-201ENST00000359353 TSKSQ9UJT2 592 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 WNK3Q9BYP7 1800 aa26.42■■□□□ 1.82
DDX42-201ENST00000359353 MEIS1O00470 390 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 FLT3P36888 993 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 PDIA5Q14554 519 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 ZNF804AQ7Z570 1209 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 ADGRF4Q8IZF3 695 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 JMJD4Q9H9V9 463 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 TMCO5BA8MYB1 307 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 PLA2G4BP0C869 781 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 KDM7AQ6ZMT4 941 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 TAF4BQ92750 862 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 EMILIN3Q9NT22 766 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 POTEFA5A3E0 1075 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 POTEIP0CG38 1075 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 RHBDL3P58872 404 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 RPS6KA1Q15418 735 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 MFSD14BQ5SR56 506 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 POTEGQ6S5H5 508 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 POTEEQ6S8J3 1075 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 PROM2Q8N271 834 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 OTUD6BQ8N6M0 293 aa26.41■■□□□ 1.82
DDX42-201ENST00000359353 ESYT2A0FGR8 921 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 E7EVH7 732 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 H0YHG0 523 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 UFL1O94874 794 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 ITGA4P13612 1032 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 PSMD2Q13200 908 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 FAM98CQ17RN3 349 aaKnown RBP26.4■■□□□ 1.82
DDX42-201ENST00000359353 DCAF17Q5H9S7 520 aaPredicted RBP26.4■■□□□ 1.82
DDX42-201ENST00000359353 GJB7Q6PEY0 223 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 ATP6V1G3Q96LB4 118 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 SPAG5Q96R06 1193 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 GANQ9H2C0 597 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 LRRC4CQ9HCJ2 640 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 MTMR4Q9NYA4 1195 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 AJAP1Q9UKB5 411 aaPredicted RBP26.4■■□□□ 1.82
DDX42-201ENST00000359353 USP17L10C9JJH3 530 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 NR2F2P24468 414 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 GPSM2P81274 684 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 ZNF473Q8WTR7 871 aaKnown RBP26.4■■□□□ 1.82
DDX42-201ENST00000359353 CD209Q9NNX6 404 aa26.4■■□□□ 1.82
DDX42-201ENST00000359353 PPP1R37O75864 691 aa26.39■■□□□ 1.82
DDX42-201ENST00000359353 IKZF4Q9H2S9 585 aa26.39■■□□□ 1.82
DDX42-201ENST00000359353 PCDHA2Q9Y5H9 948 aa26.39■■□□□ 1.82
DDX42-201ENST00000359353 COL5A3P25940 1745 aaPredicted RBP26.39■■□□□ 1.82
DDX42-201ENST00000359353 KIAA0754O94854 1291 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 TMOD1P28289 359 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 MNAT1P51948 309 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 TCERG1LQ5VWI1 586 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 EDEM3Q9BZQ6 932 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 EPN3Q9H201 632 aa26.39■■□□□ 1.81
DDX42-201ENST00000359353 LUC7LQ9NQ29 371 aaKnown RBP26.39■■□□□ 1.81
DDX42-201ENST00000359353 BMP2KQ9NSY1 1161 aaPredicted RBP26.39■■□□□ 1.81
DDX42-201ENST00000359353 ECHS1P30084 290 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 HSD17B3P37058 310 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 PSMC6P62333 389 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 SF3A3Q12874 501 aaKnown RBP eCLIP26.38■■□□□ 1.811e-6■■■■■ 35.5
DDX42-201ENST00000359353 PTGISQ16647 500 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 CCT8L2Q96SF2 557 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 CDCA7Q9BWT1 371 aaPredicted RBP26.38■■□□□ 1.81
DDX42-201ENST00000359353 KCTD10Q9H3F6 313 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 GPR75-ASB3A0A0A6YYF3 556 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 GUCY2CP25092 1073 aa26.38■■□□□ 1.81
DDX42-201ENST00000359353 UAP1Q16222 522 aaPredicted RBP26.38■■□□□ 1.81
DDX42-201ENST00000359353 TNRC6CQ9HCJ0 1690 aaKnown RBP26.38■■□□□ 1.81
DDX42-201ENST00000359353 MED24O75448 989 aa26.37■■□□□ 1.81
DDX42-201ENST00000359353 KIF4AO95239 1232 aa26.37■■□□□ 1.81
DDX42-201ENST00000359353 TAL1P17542 331 aaPredicted RBP26.37■■□□□ 1.81
DDX42-201ENST00000359353 TNNC1P63316 161 aa26.37■■□□□ 1.81
DDX42-201ENST00000359353 IFT88Q13099 833 aa26.37■■□□□ 1.81
DDX42-201ENST00000359353 ARHGEF1Q92888 912 aaKnown RBP26.37■■□□□ 1.81
DDX42-201ENST00000359353 TRIM31Q9BZY9 425 aa26.37■■□□□ 1.81
DDX42-201ENST00000359353 HDAC9Q9UKV0 1011 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms